11781 7AH9 2Q v1-1
11781_7ah9_2Q_v1-1
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RCSB PDB: 7AH9
EMDB: 11781
Structure title Substrate-engaged type 3 secretion system needle complex from Salmonella enterica typhimurium - SpaR state 1
Method ELECTRON MICROSCOPY
Resolution 3.3 Å
Source organism Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
3D View
Download PDB file DAQ[AA]
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Sequence of
3    ​T​​P​​W​​S​​G​​Y​​L​​D​​D​​V​13   ​S​​A​​K​​F​​D​​T​​G​​V​​D​​N​23   ​L​​Q​​T​​Q​​V​​T​​E​​A​​L​​D​33   ​K​​L​​A​​A​​K​​P​​S​​D​​P​​A​43   ​L​​L​​A​​A​​Y​​Q​​S​​K​​L​​S​53   ​E​​Y​​N​​L​​Y​​R​​N​​A​​Q​​S​63   ​N​​T​​V​​K​​V​​F​​K​​D​​I​​D​73   ​A​​A​​I​​I​​Q​​N​​F​​R​
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DAQ Score Table

Score range in the table: 0.65 .. 1.47
0.65
1.47
#
Residue identifier
Residue name
DAQscore[AA]
1
3
THR
1.31
2
4
PRO
1.36
3
5
TRP
1.47
4
6
SER
1.44
5
7
GLY
1.45
6
8
TYR
1.34
7
9
LEU
1.34
8
10
ASP
1.43
9
11
ASP
1.44
10
12
VAL
1.43
11
13
SER
1.45
12
14
ALA
1.45
13
15
LYS
1.46
14
16
PHE
1.34
15
17
ASP
1.25
16
18
THR
1.27
17
19
GLY
1.22
18
20
VAL
1.26
19
21
ASP
1.19
20
22
ASN
1.06
21
23
LEU
1.01
22
24
GLN
0.95
23
25
THR
0.99
24
26
GLN
1.02
25
27
VAL
1.11
26
28
THR
1.09
27
29
GLU
1.03
28
30
ALA
0.99
29
31
LEU
0.98
30
32
ASP
1.04
31
33
LYS
1.03
32
34
LEU
0.92
3D View
Download PDB file DAQ[Cα]
Render Map
SequenceNo structure available
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DAQ Score Table

Score range in the table: 0.61 .. 1.59
0.61
1.59
#
Residue identifier
Residue name
DAQscore[ATOM]
1
3
THR
0.61
2
4
PRO
0.69
3
5
TRP
0.78
4
6
SER
0.76
5
7
GLY
0.81
6
8
TYR
0.88
7
9
LEU
0.89
8
10
ASP
0.85
9
11
ASP
0.88
10
12
VAL
0.90
11
13
SER
0.96
12
14
ALA
1.01
13
15
LYS
1.02
14
16
PHE
1.04
15
17
ASP
1.03
16
18
THR
1.10
17
19
GLY
1.12
18
20
VAL
1.14
19
21
ASP
1.10
20
22
ASN
1.18
21
23
LEU
1.12
22
24
GLN
1.12
23
25
THR
1.14
24
26
GLN
1.14
25
27
VAL
1.10
26
28
THR
1.06
27
29
GLU
1.12
28
30
ALA
1.14
29
31
LEU
1.08
30
32
ASP
1.06
31
33
LYS
1.08
32
34
LEU
1.11
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
SequenceNo structure available
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DAQ Score Table

Score range in the table: -0.06 .. 0.49
-0.06
0.49
#
Residue identifier
Residue name
DAQscore[SS]
1
3
THR
0.49
2
4
PRO
0.47
3
5
TRP
0.45
4
6
SER
0.44
5
7
GLY
0.42
6
8
TYR
0.41
7
9
LEU
0.40
8
10
ASP
0.38
9
11
ASP
0.25
10
12
VAL
0.14
11
13
SER
0.07
12
14
ALA
0.02
13
15
LYS
-0.05
14
16
PHE
-0.06
15
17
ASP
-0.06
16
18
THR
-0.04
17
19
GLY
-0.03
18
20
VAL
-0.03
19
21
ASP
-0.03
20
22
ASN
-0.03
21
23
LEU
-0.03
22
24
GLN
-0.03
23
25
THR
-0.03
24
26
GLN
-0.03
25
27
VAL
-0.06
26
28
THR
-0.01
27
29
GLU
0.05
28
30
ALA
0.20
29
31
LEU
0.37
30
32
ASP
0.36
31
33
LYS
0.36
32
34
LEU
0.39
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
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DAQ Score Table

Score range in the table: 2.05 .. 2.96
2.05
2.96
#
Residue identifier
Residue name
DAQscore[Total]
1
3
THR
2.41
2
4
PRO
2.51
3
5
TRP
2.70
4
6
SER
2.64
5
7
GLY
2.69
6
8
TYR
2.63
7
9
LEU
2.63
8
10
ASP
2.67
9
11
ASP
2.57
10
12
VAL
2.46
11
13
SER
2.48
12
14
ALA
2.48
13
15
LYS
2.44
14
16
PHE
2.32
15
17
ASP
2.21
16
18
THR
2.33
17
19
GLY
2.31
18
20
VAL
2.38
19
21
ASP
2.26
20
22
ASN
2.22
21
23
LEU
2.11
22
24
GLN
2.05
23
25
THR
2.10
24
26
GLN
2.13
25
27
VAL
2.15
26
28
THR
2.14
27
29
GLU
2.20
28
30
ALA
2.33
29
31
LEU
2.44
30
32
ASP
2.45
31
33
LYS
2.47
32
34
LEU
2.42