12334 7NHN o v1-2
12334_7nhn_o_v1-2
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RCSB PDB: 7NHN
EMDB: 12334
Structure title VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
Method ELECTRON MICROSCOPY
Resolution 2.9 Å
Source organism Listeria monocytogenes EGD-e
3D View
Download PDB file DAQ[AA]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.11 .. 0.67
0.11
0.67
#
Residue identifier
Residue name
DAQscore[AA]
1
2
ALA
0.23
2
3
LYS
0.15
3
4
LYS
0.16
4
5
SER
0.27
5
6
MET
0.33
6
7
ILE
0.33
7
8
ALA
0.29
8
9
LYS
0.26
9
10
GLN
0.24
10
11
LYS
0.20
11
12
ARG
0.19
12
13
THR
0.26
13
14
PRO
0.34
14
15
LYS
0.34
15
16
TYR
0.35
16
17
ALA
0.28
17
18
VAL
0.23
18
19
GLN
0.20
19
20
ALA
0.16
20
21
TYR
0.14
21
22
THR
0.22
22
23
ARG
0.24
23
24
CYS
0.21
24
25
GLU
0.22
25
26
ARG
0.11
26
27
CYS
0.15
27
28
GLY
0.25
28
29
ARG
0.20
29
30
PRO
0.28
30
31
HIS
0.39
31
32
SER
0.35
32
33
VAL
0.36
3D View
Download PDB file DAQ[Cα]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.08 .. 0.62
-0.08
0.62
#
Residue identifier
Residue name
DAQscore[ATOM]
1
2
ALA
0.41
2
3
LYS
0.32
3
4
LYS
0.36
4
5
SER
0.21
5
6
MET
0.27
6
7
ILE
0.23
7
8
ALA
0.25
8
9
LYS
0.28
9
10
GLN
0.28
10
11
LYS
0.33
11
12
ARG
0.42
12
13
THR
0.37
13
14
PRO
0.24
14
15
LYS
0.21
15
16
TYR
0.28
16
17
ALA
0.24
17
18
VAL
0.24
18
19
GLN
0.14
19
20
ALA
0.12
20
21
TYR
0.03
21
22
THR
0.06
22
23
ARG
-0.03
23
24
CYS
0.10
24
25
GLU
0.11
25
26
ARG
0.04
26
27
CYS
0.03
27
28
GLY
0.03
28
29
ARG
0.09
29
30
PRO
-0.08
30
31
HIS
0.00
31
32
SER
0.06
32
33
VAL
0.18
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Sequence of
2    ​A​​K​​K​​S​​M​​I​​A​​K​​Q​​K​12   ​R​​T​​P​​K​​Y​​A​​V​​Q​​A​​Y​22   ​T​​R​​C​​E​​R​​C​​G​​R​​P​​H​32   ​S​​V​​I​​R​​K​​F​​K​​L​​C​​R​42   ​I​​C​​F​​R​​E​​L​​A​​Y​​K​​G​52   ​Q​​I​​P​​G​​V​​K​​K​​A​​S​​W​
colorbar

DAQ Score Table

Score range in the table: -0.20 .. 0.56
-0.20
0.56
#
Residue identifier
Residue name
DAQscore[SS]
1
2
ALA
-0.18
2
3
LYS
-0.15
3
4
LYS
-0.11
4
5
SER
-0.12
5
6
MET
-0.12
6
7
ILE
-0.16
7
8
ALA
-0.16
8
9
LYS
-0.16
9
10
GLN
-0.17
10
11
LYS
-0.18
11
12
ARG
-0.20
12
13
THR
-0.18
13
14
PRO
-0.18
14
15
LYS
-0.14
15
16
TYR
-0.13
16
17
ALA
-0.11
17
18
VAL
-0.13
18
19
GLN
-0.12
19
20
ALA
-0.09
20
21
TYR
-0.09
21
22
THR
-0.08
22
23
ARG
-0.08
23
24
CYS
0.00
24
25
GLU
0.09
25
26
ARG
0.12
26
27
CYS
0.11
27
28
GLY
0.11
28
29
ARG
0.13
29
30
PRO
0.21
30
31
HIS
0.18
31
32
SER
0.20
32
33
VAL
0.26
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.09 .. 1.67
0.09
1.67
#
Residue identifier
Residue name
DAQscore[Total]
1
2
ALA
0.46
2
3
LYS
0.31
3
4
LYS
0.41
4
5
SER
0.36
5
6
MET
0.48
6
7
ILE
0.40
7
8
ALA
0.38
8
9
LYS
0.37
9
10
GLN
0.35
10
11
LYS
0.35
11
12
ARG
0.41
12
13
THR
0.45
13
14
PRO
0.40
14
15
LYS
0.41
15
16
TYR
0.50
16
17
ALA
0.40
17
18
VAL
0.35
18
19
GLN
0.21
19
20
ALA
0.19
20
21
TYR
0.09
21
22
THR
0.20
22
23
ARG
0.13
23
24
CYS
0.30
24
25
GLU
0.42
25
26
ARG
0.27
26
27
CYS
0.29
27
28
GLY
0.39
28
29
ARG
0.43
29
30
PRO
0.42
30
31
HIS
0.57
31
32
SER
0.61
32
33
VAL
0.79