13805 7Q4K BV v1-3
13805_7q4k_BV_v1-3
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RCSB PDB: 7Q4K
EMDB: 13805
Structure title Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chain
Method ELECTRON MICROSCOPY
Resolution 3.0 Å
Source organism Escherichia coli
3D View
Download PDB file DAQ[AA]
Render Map
Sequence of
1    ​M​​F​​T​​I​​N​​A​​E​​V​​R​​K​11   ​E​​Q​​G​​K​​G​​A​​S​​R​​R​​L​21   ​R​​A​​A​​N​​K​​F​​P​​A​​I​​I​31   ​Y​​G​​G​​K​​E​​A​​P​​L​​A​​I​41   ​E​​L​​D​​H​​D​​K​​V​​M​​N​​M​51   ​Q​​A​​K​​A​​E​​F​​Y​​S​​E​​V​61   ​L​​T​​I​​V​​V​​D​​G​​K​​E​​I​71   ​K​​V​​K​​A​​Q​​D​​V​​Q​​R​​H​81   ​P​​Y​​K​​P​​K​​L​​Q​​H​​I​​D​91   ​F​​V​​R​​A​
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DAQ Score Table

Score range in the table: 0.43 .. 1.24
0.43
1.24
#
Residue identifier
Residue name
DAQscore[AA]
1
1
MET
0.90
2
2
PHE
0.90
3
3
THR
0.81
4
4
ILE
0.92
5
5
ASN
0.66
6
6
ALA
0.68
7
7
GLU
0.72
8
8
VAL
0.73
9
9
ARG
0.69
10
10
LYS
0.69
11
11
GLU
0.73
12
12
GLN
0.66
13
13
GLY
0.70
14
14
LYS
0.69
15
15
GLY
0.66
16
16
ALA
0.49
17
17
SER
0.49
18
18
ARG
0.53
19
19
ARG
0.65
20
20
LEU
0.67
21
21
ARG
0.69
22
22
ALA
0.77
23
23
ALA
0.74
24
24
ASN
1.00
25
25
LYS
1.00
26
26
PHE
0.97
27
27
PRO
1.00
28
28
ALA
1.03
29
29
ILE
1.05
30
30
ILE
1.12
31
31
TYR
1.23
32
32
GLY
1.09
3D View
Download PDB file DAQ[Cα]
Render Map
Converting to mmCIF
SequenceNo structure available
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DAQ Score Table

Score range in the table: 0.33 .. 1.10
0.33
1.10
#
Residue identifier
Residue name
DAQscore[ATOM]
1
1
MET
0.89
2
2
PHE
0.94
3
3
THR
1.00
4
4
ILE
1.04
5
5
ASN
1.09
6
6
ALA
1.10
7
7
GLU
0.91
8
8
VAL
0.93
9
9
ARG
0.97
10
10
LYS
0.95
11
11
GLU
1.03
12
12
GLN
1.01
13
13
GLY
1.07
14
14
LYS
1.00
15
15
GLY
1.01
16
16
ALA
0.89
17
17
SER
0.95
18
18
ARG
0.84
19
19
ARG
0.73
20
20
LEU
0.69
21
21
ARG
0.71
22
22
ALA
0.66
23
23
ALA
0.57
24
24
ASN
0.55
25
25
LYS
0.53
26
26
PHE
0.69
27
27
PRO
0.67
28
28
ALA
0.51
29
29
ILE
0.58
30
30
ILE
0.59
31
31
TYR
0.62
32
32
GLY
0.64
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.12 .. 0.89
0.12
0.89
#
Residue identifier
Residue name
DAQscore[SS]
1
1
MET
0.27
2
2
PHE
0.18
3
3
THR
0.12
4
4
ILE
0.12
5
5
ASN
0.14
6
6
ALA
0.17
7
7
GLU
0.22
8
8
VAL
0.28
9
9
ARG
0.35
10
10
LYS
0.41
11
11
GLU
0.45
12
12
GLN
0.56
13
13
GLY
0.57
14
14
LYS
0.56
15
15
GLY
0.56
16
16
ALA
0.53
17
17
SER
0.52
18
18
ARG
0.53
19
19
ARG
0.58
20
20
LEU
0.67
21
21
ARG
0.77
22
22
ALA
0.79
23
23
ALA
0.80
24
24
ASN
0.81
25
25
LYS
0.81
26
26
PHE
0.78
27
27
PRO
0.73
28
28
ALA
0.67
29
29
ILE
0.63
30
30
ILE
0.60
31
31
TYR
0.57
32
32
GLY
0.59
3D View
Download PDB file DAQ[Total]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 1.46 .. 2.82
1.46
2.82
#
Residue identifier
Residue name
DAQscore[Total]
1
1
MET
2.06
2
2
PHE
2.02
3
3
THR
1.93
4
4
ILE
2.08
5
5
ASN
1.89
6
6
ALA
1.95
7
7
GLU
1.85
8
8
VAL
1.94
9
9
ARG
2.01
10
10
LYS
2.05
11
11
GLU
2.21
12
12
GLN
2.23
13
13
GLY
2.34
14
14
LYS
2.25
15
15
GLY
2.22
16
16
ALA
1.90
17
17
SER
1.97
18
18
ARG
1.91
19
19
ARG
1.96
20
20
LEU
2.03
21
21
ARG
2.17
22
22
ALA
2.22
23
23
ALA
2.12
24
24
ASN
2.36
25
25
LYS
2.34
26
26
PHE
2.43
27
27
PRO
2.41
28
28
ALA
2.21
29
29
ILE
2.26
30
30
ILE
2.30
31
31
TYR
2.43
32
32
GLY
2.32