16541 8CBJ G v1-1
16541_8cbj_G_v1-1
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RCSB PDB: 8CBJ
EMDB: 16541
Structure title Cryo-EM structure of Otu2-bound cytoplasmic pre-40S ribosome biogenesis complex
Method ELECTRON MICROSCOPY
Resolution 3.8 Å
Source organism Saccharomyces cerevisiae W303
3D View
Download PDB file DAQ[AA]
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DAQ Score Table

Score range in the table: -0.09 .. 0.72
-0.09
0.72
#
Residue identifier
Residue name
DAQscore[AA]
1
1
MET
-0.05
2
2
LYS
0.01
3
3
LEU
0.04
4
4
ASN
0.03
5
5
ILE
-0.02
6
6
SER
-0.01
7
7
TYR
-0.09
8
8
PRO
-0.07
9
9
VAL
-0.06
10
10
ASN
-0.03
11
11
GLY
-0.02
12
12
SER
0.07
13
13
GLN
0.11
14
14
LYS
0.24
15
15
THR
0.24
16
16
PHE
0.19
17
17
GLU
0.12
18
18
ILE
0.07
19
19
ASP
0.10
20
20
ASP
0.11
21
21
GLU
0.09
22
22
HIS
0.04
23
23
ARG
0.08
24
24
ILE
0.12
25
25
ARG
0.12
26
26
VAL
0.19
27
27
PHE
0.19
28
28
PHE
0.19
29
29
ASP
0.17
30
30
LYS
0.15
31
31
ARG
0.13
32
32
ILE
0.17
3D View
Download PDB file DAQ[Cα]
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DAQ Score Table

Score range in the table: 0.09 .. 0.89
0.09
0.89
#
Residue identifier
Residue name
DAQscore[ATOM]
1
1
MET
0.52
2
2
LYS
0.45
3
3
LEU
0.43
4
4
ASN
0.41
5
5
ILE
0.39
6
6
SER
0.38
7
7
TYR
0.40
8
8
PRO
0.40
9
9
VAL
0.39
10
10
ASN
0.40
11
11
GLY
0.41
12
12
SER
0.41
13
13
GLN
0.37
14
14
LYS
0.43
15
15
THR
0.41
16
16
PHE
0.37
17
17
GLU
0.34
18
18
ILE
0.28
19
19
ASP
0.27
20
20
ASP
0.26
21
21
GLU
0.29
22
22
HIS
0.30
23
23
ARG
0.32
24
24
ILE
0.29
25
25
ARG
0.30
26
26
VAL
0.30
27
27
PHE
0.32
28
28
PHE
0.33
29
29
ASP
0.30
30
30
LYS
0.29
31
31
ARG
0.28
32
32
ILE
0.23
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
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DAQ Score Table

Score range in the table: -0.37 .. 1.09
-0.37
1.09
#
Residue identifier
Residue name
DAQscore[SS]
1
1
MET
0.61
2
2
LYS
0.58
3
3
LEU
0.56
4
4
ASN
0.52
5
5
ILE
0.49
6
6
SER
0.35
7
7
TYR
0.19
8
8
PRO
0.22
9
9
VAL
0.17
10
10
ASN
0.18
11
11
GLY
0.18
12
12
SER
0.17
13
13
GLN
0.11
14
14
LYS
0.11
15
15
THR
0.06
16
16
PHE
0.08
17
17
GLU
0.09
18
18
ILE
0.07
19
19
ASP
0.03
20
20
ASP
0.01
21
21
GLU
0.02
22
22
HIS
0.02
23
23
ARG
0.04
24
24
ILE
0.03
25
25
ARG
0.13
26
26
VAL
0.19
27
27
PHE
0.14
28
28
PHE
0.18
29
29
ASP
0.13
30
30
LYS
0.10
31
31
ARG
0.06
32
32
ILE
0.01
3D View
Download PDB file DAQ[Total]
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DAQ Score Table