19488 8RTD A v1-2
19488_8rtd_A_v1-2
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RCSB PDB: 8RTD
EMDB: 19488
Structure title Stalk-Arches-IMC structure from the fully-assembled R388 type IV secretion system determined by cryo-EM.
Method ELECTRON MICROSCOPY
Resolution 4.33 Å
Source organism Escherichia coli
3D View
Download PDB file DAQ[AA]
Render Map
SequenceNo structure available
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DAQ Score Table

Score range in the table: -0.09 .. 0.43
-0.09
0.43
#
Residue identifier
Residue name
DAQscore[AA]
1
33
ALA
-0.07
2
34
LEU
-0.07
3
35
ASP
-0.06
4
36
PHE
-0.06
5
37
VAL
-0.08
6
38
GLN
-0.09
7
39
GLN
-0.06
8
40
PHE
-0.07
9
41
ALA
-0.09
10
42
ARG
-0.07
11
43
MET
-0.02
12
44
LYS
-0.02
13
45
GLU
-0.03
14
46
GLN
-0.05
15
47
LEU
-0.02
16
48
ASP
-0.04
17
49
THR
-0.01
18
50
ALA
0.00
19
51
LYS
0.03
20
52
ASP
0.02
21
53
GLN
0.05
22
54
LEU
0.02
23
55
ALA
0.02
24
56
GLU
0.03
25
57
ALA
0.05
26
58
GLN
0.07
27
59
ARG
0.08
28
60
MET
0.11
29
61
TYR
0.11
30
62
GLU
0.10
31
63
ALA
0.13
32
64
VAL
0.13
3D View
Download PDB file DAQ[Cα]
Render Map
SequenceNo structure available
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DAQ Score Table

Score range in the table: -0.31 .. 0.38
-0.31
0.38
#
Residue identifier
Residue name
DAQscore[ATOM]
1
33
ALA
-0.10
2
34
LEU
-0.10
3
35
ASP
-0.10
4
36
PHE
-0.10
5
37
VAL
-0.09
6
38
GLN
-0.09
7
39
GLN
-0.11
8
40
PHE
-0.11
9
41
ALA
-0.10
10
42
ARG
-0.10
11
43
MET
-0.11
12
44
LYS
-0.10
13
45
GLU
-0.09
14
46
GLN
-0.07
15
47
LEU
-0.06
16
48
ASP
-0.04
17
49
THR
-0.03
18
50
ALA
-0.02
19
51
LYS
-0.01
20
52
ASP
-0.01
21
53
GLN
0.00
22
54
LEU
0.00
23
55
ALA
0.01
24
56
GLU
0.01
25
57
ALA
0.01
26
58
GLN
0.02
27
59
ARG
0.03
28
60
MET
0.04
29
61
TYR
0.04
30
62
GLU
0.06
31
63
ALA
0.05
32
64
VAL
0.05
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Processing file... [78577/78577]
SequenceNo structure available
colorbar

DAQ Score Table

3D View
Download PDB file DAQ[Total]
Render Map
Parsing response... [78577/78577]
SequenceNo structure available
colorbar

DAQ Score Table