20813 6ULC D v2-1
20813_6ulc_D_v2-1
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RCSB PDB: 6ULC
EMDB: 20813
Structure title Structure of full-length, fully glycosylated, non-modified HIV-1 gp160 bound to PG16 Fab at a nominal resolution of 4.6 Angstrom
Method ELECTRON MICROSCOPY
Resolution 4.6 Å
Source organism Human immunodeficiency virus 1
3D View
Download PDB file DAQ[AA]
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DAQ Score Table

Score range in the table: -0.16 .. 0.67
-0.16
0.67
#
Residue identifier
Residue name
DAQscore[AA]
1
521
GLY
0.19
2
522
PHE
0.20
3
523
LEU
0.21
4
524
GLY
0.19
5
525
THR
0.17
6
526
ALA
0.17
7
527
GLY
0.16
8
528
SER
0.15
9
529
THR
0.15
10
530
MET
0.16
11
531
GLY
0.14
12
532
ALA
0.16
13
533
ALA
0.15
14
534
SER
0.10
15
535
ILE
0.05
16
536
THR
-0.02
17
537
LEU
-0.04
18
538
THR
-0.07
19
539
VAL
-0.04
20
540
GLN
-0.05
21
541
VAL
-0.08
22
542
ARG
-0.10
23
543
LYS
-0.08
24
544
LEU
-0.05
25
545
LEU
-0.05
26
546
SER
-0.08
27
547
GLY
-0.10
28
548
ILE
-0.09
29
549
VAL
-0.15
30
550
GLN
-0.12
31
551
GLN
-0.14
32
552
GLN
-0.11
3D View
Download PDB file DAQ[Cα]
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DAQ Score Table

Score range in the table: -0.66 .. 0.68
-0.66
0.68
#
Residue identifier
Residue name
DAQscore[ATOM]
1
521
GLY
-0.14
2
522
PHE
-0.09
3
523
LEU
-0.06
4
524
GLY
-0.02
5
525
THR
0.02
6
526
ALA
0.05
7
527
GLY
0.07
8
528
SER
0.07
9
529
THR
0.11
10
530
MET
0.11
11
531
GLY
0.25
12
532
ALA
0.25
13
533
ALA
0.27
14
534
SER
0.26
15
535
ILE
0.23
16
536
THR
0.21
17
537
LEU
0.18
18
538
THR
0.23
19
539
VAL
0.15
20
540
GLN
0.18
21
541
VAL
0.16
22
542
ARG
0.17
23
543
LYS
0.15
24
544
LEU
0.11
25
545
LEU
0.10
26
546
SER
0.12
27
547
GLY
0.14
28
548
ILE
-0.03
29
549
VAL
-0.07
30
550
GLN
-0.11
31
551
GLN
-0.06
32
552
GLN
-0.08
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
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DAQ Score Table

Score range in the table: -0.93 .. 0.79
-0.93
0.79
#
Residue identifier
Residue name
DAQscore[SS]
1
521
GLY
-0.86
2
522
PHE
-0.93
3
523
LEU
-0.91
4
524
GLY
-0.87
5
525
THR
-0.80
6
526
ALA
-0.72
7
527
GLY
-0.67
8
528
SER
-0.69
9
529
THR
-0.77
10
530
MET
-0.77
11
531
GLY
-0.67
12
532
ALA
-0.65
13
533
ALA
-0.66
14
534
SER
-0.60
15
535
ILE
-0.59
16
536
THR
-0.56
17
537
LEU
-0.55
18
538
THR
-0.61
19
539
VAL
-0.55
20
540
GLN
-0.48
21
541
VAL
-0.41
22
542
ARG
-0.39
23
543
LYS
-0.36
24
544
LEU
-0.43
25
545
LEU
-0.52
26
546
SER
-0.59
27
547
GLY
-0.58
28
548
ILE
-0.49
29
549
VAL
-0.52
30
550
GLN
-0.57
31
551
GLN
-0.55
32
552
GLN
-0.58
3D View
Download PDB file DAQ[Total]
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DAQ Score Table