22156 6XEY G v2-4
22156_6xey_G_v2-4
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RCSB PDB: 6XEY
EMDB: 22156
Structure title Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-4
Method ELECTRON MICROSCOPY
Resolution 3.25 Å
Source organism Homo sapiens
3D View
Download PDB file DAQ[AA]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.14 .. 0.65
-0.14
0.65
#
Residue identifier
Residue name
DAQscore[AA]
1
3
ALA
0.15
2
4
LEU
0.07
3
5
THR
0.09
4
6
GLN
-0.09
5
7
PRO
0.07
6
8
PRO
-0.01
7
9
SER
-0.10
8
11
ALA
-0.14
9
12
SER
-0.06
10
13
GLY
-0.04
11
14
SER
-0.03
12
15
PRO
0.01
13
16
GLY
0.07
14
17
GLN
0.07
15
18
SER
-0.10
16
19
VAL
-0.08
17
20
THR
-0.05
18
21
ILE
-0.14
19
22
SER
-0.11
20
23
CYS
-0.01
21
24
THR
0.06
22
25
GLY
0.19
23
26
THR
0.11
24
27
SER
0.20
25
27
SER
0.20
26
27
ASP
0.20
27
27
VAL
0.20
28
28
GLY
0.31
29
29
GLY
0.31
30
30
TYR
0.33
31
31
ASN
0.36
32
32
TYR
0.40
3D View
Download PDB file DAQ[Cα]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.22 .. 0.75
-0.22
0.75
#
Residue identifier
Residue name
DAQscore[ATOM]
1
3
ALA
0.43
2
4
LEU
0.23
3
5
THR
0.14
4
6
GLN
0.20
5
7
PRO
0.24
6
8
PRO
0.28
7
9
SER
0.31
8
11
ALA
0.34
9
12
SER
0.36
10
13
GLY
0.37
11
14
SER
0.36
12
15
PRO
0.35
13
16
GLY
0.30
14
17
GLN
0.29
15
18
SER
0.11
16
19
VAL
0.09
17
20
THR
0.10
18
21
ILE
0.06
19
22
SER
0.06
20
23
CYS
0.17
21
24
THR
0.28
22
25
GLY
0.23
23
26
THR
0.23
24
27
SER
0.22
25
27
SER
0.22
26
27
ASP
0.22
27
27
VAL
0.22
28
28
GLY
0.19
29
29
GLY
0.20
30
30
TYR
0.17
31
31
ASN
0.18
32
32
TYR
0.09
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Sequence of
3    ​A​​L​​T​​Q​​P​​P​​S​​A​​S​​G​14   ​S​​P​​G​​Q​​S​​V​​T​​I​​S​​C​24   ​T​​G​​T​​(S|S|D|V)​​G​​G​​Y​​N​​Y​​V​34   ​S​​W​​Y​​Q​​Q​​H​​P​​G​​K​​A​44   ​P​​K​​L​​M​​I​​Y​​E​​V​​S​​K​54   ​R​​P​​S​​G​​V​​P​​D​​R​​F​​S​64   ​G​​S​​K​​S​​G​​N​​T​​A​​S​​L​74   ​T​​V​​S​​G​​L​​Q​​A​​E​​D​​E​84   ​A​​D​​Y​​Y​​C​​S​​S​​Y​​A​​G​94   ​S​​(N|N)​​L​​V​​F​​G​​G​​G​​T​​K​104  ​L​​T​​V​​L​
colorbar

DAQ Score Table

Score range in the table: -0.73 .. 0.60
-0.73
0.60
#
Residue identifier
Residue name
DAQscore[SS]
1
3
ALA
-0.71
2
4
LEU
-0.73
3
5
THR
-0.65
4
6
GLN
-0.59
5
7
PRO
-0.53
6
8
PRO
-0.48
7
9
SER
-0.50
8
11
ALA
-0.54
9
12
SER
-0.55
10
13
GLY
-0.56
11
14
SER
-0.50
12
15
PRO
-0.46
13
16
GLY
-0.48
14
17
GLN
-0.57
15
18
SER
-0.60
16
19
VAL
-0.55
17
20
THR
-0.51
18
21
ILE
-0.44
19
22
SER
-0.41
20
23
CYS
-0.41
21
24
THR
-0.35
22
25
GLY
-0.29
23
26
THR
-0.23
24
27
SER
-0.17
25
27
SER
-0.17
26
27
ASP
-0.17
27
27
VAL
-0.17
28
28
GLY
-0.07
29
29
GLY
-0.05
30
30
TYR
0.05
31
31
ASN
0.10
32
32
TYR
0.14
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.74 .. 1.39
-0.74
1.39
#
Residue identifier
Residue name
DAQscore[Total]
1
3
ALA
-0.12
2
4
LEU
-0.44
3
5
THR
-0.42
4
6
GLN
-0.48
5
7
PRO
-0.22
6
8
PRO
-0.21
7
9
SER
-0.29
8
11
ALA
-0.34
9
12
SER
-0.26
10
13
GLY
-0.23
11
14
SER
-0.18
12
15
PRO
-0.10
13
16
GLY
-0.11
14
17
GLN
-0.21
15
18
SER
-0.59
16
19
VAL
-0.54
17
20
THR
-0.46
18
21
ILE
-0.53
19
22
SER
-0.46
20
23
CYS
-0.25
21
24
THR
-0.01
22
25
GLY
0.14
23
26
THR
0.11
24
27
SER
0.25
25
27
SER
0.25
26
27
ASP
0.25
27
27
VAL
0.25
28
28
GLY
0.43
29
29
GLY
0.46
30
30
TYR
0.54
31
31
ASN
0.65
32
32
TYR
0.63