22433 7JQC J v1-3
22433_7jqc_J_v1-3
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RCSB PDB: 7JQC
EMDB: 22433
Structure title SARS-CoV-2 Nsp1, CrPV IRES and rabbit 40S ribosome complex
Method ELECTRON MICROSCOPY
Resolution 3.3 Å
Source organism Oryctolagus cuniculus
3D View
Download PDB file DAQ[AA]
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DAQ Score Table

Score range in the table: -0.11 .. 0.84
-0.11
0.84
#
Residue identifier
Residue name
DAQscore[AA]
1
2
GLY
0.26
2
3
ILE
0.29
3
4
SER
0.23
4
5
ARG
0.26
5
6
ASP
0.26
6
7
ASN
0.39
7
8
TRP
0.35
8
9
HIS
0.31
9
10
LYS
0.31
10
11
ARG
0.43
11
12
ARG
0.33
12
13
LYS
0.34
13
14
THR
0.23
14
15
GLY
0.17
15
16
GLY
0.17
16
17
LYS
0.12
17
18
ARG
0.13
18
19
LYS
0.13
19
20
PRO
0.15
20
21
TYR
0.28
21
22
HIS
0.31
22
23
LYS
0.36
23
24
LYS
0.36
24
25
ARG
0.42
25
26
LYS
0.35
26
27
TYR
0.40
27
28
GLU
0.50
28
29
LEU
0.48
29
30
GLY
0.39
30
31
ARG
0.57
31
32
PRO
0.55
32
33
ALA
0.53
3D View
Download PDB file DAQ[Cα]
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DAQ Score Table

Score range in the table: 0.12 .. 0.77
0.12
0.77
#
Residue identifier
Residue name
DAQscore[ATOM]
1
2
GLY
0.29
2
3
ILE
0.34
3
4
SER
0.38
4
5
ARG
0.38
5
6
ASP
0.27
6
7
ASN
0.29
7
8
TRP
0.28
8
9
HIS
0.32
9
10
LYS
0.33
10
11
ARG
0.37
11
12
ARG
0.46
12
13
LYS
0.45
13
14
THR
0.41
14
15
GLY
0.37
15
16
GLY
0.37
16
17
LYS
0.44
17
18
ARG
0.42
18
19
LYS
0.40
19
20
PRO
0.35
20
21
TYR
0.33
21
22
HIS
0.35
22
23
LYS
0.29
23
24
LYS
0.31
24
25
ARG
0.45
25
26
LYS
0.47
26
27
TYR
0.52
27
28
GLU
0.53
28
29
LEU
0.48
29
30
GLY
0.41
30
31
ARG
0.40
31
32
PRO
0.50
32
33
ALA
0.48
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
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DAQ Score Table

Score range in the table: -0.41 .. 0.95
-0.41
0.95
#
Residue identifier
Residue name
DAQscore[SS]
1
2
GLY
-0.40
2
3
ILE
-0.41
3
4
SER
-0.40
4
5
ARG
-0.38
5
6
ASP
-0.34
6
7
ASN
-0.30
7
8
TRP
-0.26
8
9
HIS
-0.23
9
10
LYS
-0.19
10
11
ARG
-0.16
11
12
ARG
-0.16
12
13
LYS
-0.13
13
14
THR
-0.13
14
15
GLY
-0.10
15
16
GLY
-0.08
16
17
LYS
-0.09
17
18
ARG
-0.13
18
19
LYS
-0.16
19
20
PRO
-0.15
20
21
TYR
-0.11
21
22
HIS
-0.07
22
23
LYS
-0.08
23
24
LYS
-0.10
24
25
ARG
-0.18
25
26
LYS
-0.19
26
27
TYR
-0.22
27
28
GLU
-0.22
28
29
LEU
-0.23
29
30
GLY
-0.23
30
31
ARG
-0.24
31
32
PRO
-0.24
32
33
ALA
-0.22
3D View
Download PDB file DAQ[Total]
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DAQ Score Table

Score range in the table: 0.16 .. 2.28
0.16
2.28
#
Residue identifier
Residue name
DAQscore[Total]
1
2
GLY
0.16
2
3
ILE
0.22
3
4
SER
0.21
4
5
ARG
0.27
5
6
ASP
0.19
6
7
ASN
0.37
7
8
TRP
0.36
8
9
HIS
0.40
9
10
LYS
0.44
10
11
ARG
0.64
11
12
ARG
0.63
12
13
LYS
0.67
13
14
THR
0.50
14
15
GLY
0.44
15
16
GLY
0.46
16
17
LYS
0.47
17
18
ARG
0.42
18
19
LYS
0.38
19
20
PRO
0.34
20
21
TYR
0.51
21
22
HIS
0.58
22
23
LYS
0.58
23
24
LYS
0.57
24
25
ARG
0.70
25
26
LYS
0.63
26
27
TYR
0.71
27
28
GLU
0.80
28
29
LEU
0.72
29
30
GLY
0.57
30
31
ARG
0.73
31
32
PRO
0.80
32
33
ALA
0.79