27427 8DGJ N v1-1
27427_8dgj_N_v1-1
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RCSB PDB: 8DGJ
EMDB: 27427
Structure title Structural Basis of MicroRNA Biogenesis by Dicer-1 and Its Partner Protein Loqs-PB - complex Ib
Method ELECTRON MICROSCOPY
Resolution 4.02 Å
Source organism Drosophila melanogaster
3D View
Download PDB file DAQ[AA]
Render Map
Sequence of
358  ​T​​Q​​H​​S​​N​​K​​V​​S​​Q​​F​368  ​H​​K​​T​​L​​K​​N​​A​​T​​G​​K​378  ​K​​L​​L​​K​​L​​Q​​K​​T​​C​​L​388  ​K​​N​​N​​K​​I​​D​​Y​​I​​K​​L​398  ​L​​G​​E​​I​​A​​T​​E​​N​​Q​​F​408  ​E​​V​​T​​Y​​V​​D​​I​​E​​E​​K​418  ​T​​F​​S​​G​​Q​​F​​Q​​C​​L​​V​428  ​Q​​L​​S​​T​​L​​P​​V​​G​​V​​C​438  ​H​​G​​S​​G​​P​​T​​A​​A​​D​​A​448  ​Q​​R​​H​​A​​A​​Q​​N​​A​​L​​E​458  ​Y​​L​​K​​I​​M​​T​​K​​K​
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DAQ Score Table

Score range in the table: -0.13 .. 0.35
-0.13
0.35
#
Residue identifier
Residue name
DAQscore[AA]
1
358
THR
0.01
2
359
GLN
-0.04
3
360
HIS
-0.01
4
361
SER
-0.01
5
362
ASN
-0.03
6
363
LYS
-0.04
7
364
VAL
-0.05
8
365
SER
-0.10
9
366
GLN
-0.08
10
367
PHE
-0.08
11
368
HIS
-0.07
12
369
LYS
-0.11
13
370
THR
-0.07
14
371
LEU
-0.07
15
372
LYS
-0.07
16
373
ASN
-0.06
17
374
ALA
-0.04
18
375
THR
-0.02
19
376
GLY
-0.03
20
377
LYS
-0.01
21
378
LYS
0.04
22
379
LEU
0.05
23
380
LEU
0.05
24
381
LYS
0.08
25
382
LEU
0.08
26
383
GLN
0.09
27
384
LYS
0.13
28
385
THR
0.15
29
386
CYS
0.12
30
387
LEU
0.14
31
388
LYS
0.16
32
389
ASN
0.15
3D View
Download PDB file DAQ[Cα]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.56 .. 0.41
-0.56
0.41
#
Residue identifier
Residue name
DAQscore[ATOM]
1
358
THR
-0.36
2
359
GLN
-0.53
3
360
HIS
-0.56
4
361
SER
-0.49
5
362
ASN
-0.43
6
363
LYS
-0.41
7
364
VAL
-0.37
8
365
SER
-0.55
9
366
GLN
-0.50
10
367
PHE
-0.46
11
368
HIS
-0.47
12
369
LYS
-0.47
13
370
THR
-0.50
14
371
LEU
-0.52
15
372
LYS
-0.44
16
373
ASN
-0.39
17
374
ALA
-0.40
18
375
THR
-0.33
19
376
GLY
-0.29
20
377
LYS
-0.26
21
378
LYS
-0.10
22
379
LEU
-0.13
23
380
LEU
-0.21
24
381
LYS
-0.24
25
382
LEU
-0.21
26
383
GLN
-0.20
27
384
LYS
-0.03
28
385
THR
-0.06
29
386
CYS
-0.03
30
387
LEU
-0.02
31
388
LYS
0.03
32
389
ASN
0.05
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.30 .. 0.70
-0.30
0.70
#
Residue identifier
Residue name
DAQscore[SS]
1
358
THR
-0.05
2
359
GLN
-0.13
3
360
HIS
-0.18
4
361
SER
-0.18
5
362
ASN
-0.23
6
363
LYS
-0.22
7
364
VAL
-0.21
8
365
SER
-0.24
9
366
GLN
-0.22
10
367
PHE
-0.21
11
368
HIS
-0.25
12
369
LYS
-0.30
13
370
THR
-0.25
14
371
LEU
-0.24
15
372
LYS
-0.26
16
373
ASN
-0.24
17
374
ALA
-0.18
18
375
THR
-0.20
19
376
GLY
-0.22
20
377
LYS
-0.23
21
378
LYS
-0.17
22
379
LEU
-0.15
23
380
LEU
-0.16
24
381
LYS
-0.10
25
382
LEU
-0.09
26
383
GLN
-0.07
27
384
LYS
-0.04
28
385
THR
-0.04
29
386
CYS
-0.06
30
387
LEU
-0.04
31
388
LYS
0.03
32
389
ASN
0.05
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table