27959 8E98 A v1-1
Structure title D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in nanodisc - intact conformation
Method ELECTRON MICROSCOPY
Resolution 3.75 Å
Source organism Homo sapiens

Converting to mmCIF
SequenceNo structure available
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DAQ Score Table

Score range in the table: -0.18 .. 0.94
-0.18
0.94
#
Residue identifier
Residue name
DAQscore[AA]
1
25
LYS
0.02
2
26
ILE
0.01
3
27
VAL
0.01
4
28
ASN
0.02
5
29
ILE
0.05
6
30
GLY
0.04
7
31
ALA
0.06
8
32
VAL
0.06
9
33
LEU
0.02
10
34
SER
0.02
11
35
THR
0.04
12
36
ARG
0.10
13
37
LYS
0.08
14
38
HIS
0.12
15
39
GLU
0.16
16
40
GLN
0.22
17
41
MET
0.18
18
42
PHE
0.17
19
43
ARG
0.14
20
44
GLU
0.21
21
45
ALA
0.24
22
46
VAL
0.22
23
47
ASN
0.26
24
48
GLN
0.25
25
49
ALA
0.24
26
50
ASN
0.21
27
51
LYS
0.23
28
52
ARG
0.22
29
53
HIS
0.26
30
54
GLY
0.23
31
55
SER
0.17
32
56
TRP
0.17
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.22 .. 0.91
-0.22
0.91
#
Residue identifier
Residue name
DAQscore[ATOM]
1
25
LYS
-0.22
2
26
ILE
-0.19
3
27
VAL
-0.16
4
28
ASN
-0.13
5
29
ILE
-0.10
6
30
GLY
-0.09
7
31
ALA
-0.09
8
32
VAL
-0.06
9
33
LEU
-0.05
10
34
SER
-0.04
11
35
THR
-0.05
12
36
ARG
-0.05
13
37
LYS
0.00
14
38
HIS
0.01
15
39
GLU
0.07
16
40
GLN
0.12
17
41
MET
0.11
18
42
PHE
0.13
19
43
ARG
0.16
20
44
GLU
0.18
21
45
ALA
0.16
22
46
VAL
0.14
23
47
ASN
0.13
24
48
GLN
0.11
25
49
ALA
0.10
26
50
ASN
0.11
27
51
LYS
0.09
28
52
ARG
0.09
29
53
HIS
0.08
30
54
GLY
0.07
31
55
SER
0.05
32
56
TRP
0.00
Sequence of
25   ​K​​I​​V​​N​​I​​G​​A​​V​​L​​S​35   ​T​​R​​K​​H​​E​​Q​​M​​F​​R​​E​45   ​A​​V​​N​​Q​​A​​N​​K​​R​​H​​G​55   ​S​​W​​K​​I​​Q​​L​​N​​A​​T​​S​65   ​V​​T​​H​​K​​P​​N​​A​​I​​Q​​M​75   ​A​​L​​S​​V​​C​​E​​D​​L​​I​​S​85   ​S​​Q​​V​​Y​​A​​I​​L​​V​​S​​H​95   ​P​​P​​T​​P​​N​​D​​H​​F​​T​​P​105  ​T​​P​​V​​S​​Y​​T​​A​​G​​F​​Y​115  ​R​​I​​P​​V​​L​​G​​L​​T​​T​​R​125  ​M​​S​​I​​Y​​S​​D​​K​​S​​I​​H​135  ​L​​S​​F​​L​​R​​T​​V​​P​​P​​Y​145  ​S​​H​​Q​​S​​S​​V​​W​​F​​E​​M​155  ​M​​R​​V​​Y​​S​​W​​N​​H​​I​​I​165  ​L​​L​​V​​S​​D​​D​​H​​E​​G​​R​175  ​A​​A​​Q​​K​​R​​L​​E​​T​​L​​L​185  ​E​​E​​R​​E​​S​​K​​A​​E​​K​​V​195  ​L​​Q​​F​​D​​P​​G​​T​​K​​N​​V​205  ​T​​A​​L​​L​​M​​E​​A​​K​​E​​L​215  ​E​​A​​R​​V​​I​​I​​L​​S​​A​​S​225  ​E​​D​​D​​A​​A​​T​​V​​Y​​R​​A​235  ​A​​A​​M​​L​​N​​M​​T​​G​​S​​G​245  ​Y​​V​​W​​L​​V​​G​​E​​R​​E​​I​255  ​S​​G​​N​​A​​L​​R​​Y​​A​​P​​D​265  ​G​​I​​L​​G​​L​​Q​​L​​I​​N​​G​275  ​K​​N​​E​​S​​A​​H​​I​​S​​D​​A​285  ​V​​G​​V​​V​​A​​Q​​A​​V​​H​​E​295  ​L​​L​​E​​K​​E​​N​​I​​T​​D​​P​305  ​P​​R​​G​​C​​V​​G​​N​​T​​N​​I​315  ​W​​K​​T​​G​​P​​L​​F​​K​​R​​V​325  ​L​​M​​S​​S​​K​​Y​​A​​D​​G​​V​335  ​T​​G​​R​​V​​E​​F​​N​​E​​D​​G​345  ​D​​R​​K​​F​​A​​N​​Y​​S​​I​​M​355  ​N​​L​​Q​​N​​R​​K​​L​​V​​Q​​V​365  ​G​​I​​Y​​N​​G​​T​​H​​V​​I​​P​375  ​N​​D​​R​​K​​I​​I​​W​​P​​G​​G​385  ​E​​T​​E​​K​​P​​R​​G​​Y​​Q​​M​395  ​S​​T​​R​​L​​K​​I​​V​​T​​I​​H​405  ​Q​​E​​P​​F​​V​​Y​​V​​K​​P​​T​415  ​L​​S​​D​​G​​T​​C​​K​​E​​E​​F​425  ​T​​V​​N​​G​​D​​P​​V​​K​​K​​V​435  ​I​​C​​T​​G​​P​​N​​R​​H​​T​​V​452  ​P​​Q​​C​​C​​Y​​G​​F​​C​​I​​D​462  ​L​​L​​I​​K​​L​​A​​R​​T​​M​​N​472  ​F​​T​​Y​​E​​V​​H​​L​​V​​A​​D​482  ​G​​K​​F​​G​​T​​Q​​E​​R​​V​​N​492  ​N​​S​​N​​K​​K​​E​​W​​N​​G​​M​502  ​M​​G​​E​​L​​L​​S​​G​​Q​​A​​D​512  ​M​​I​​V​​A​​P​​L​​T​​I​​N​​N​522  ​E​​R​​A​​Q​​Y​​I​​E​​F​​S​​K​532  ​P​​F​​K​​Y​​Q​​G​​L​​T​​I​​L​542  ​V​​K​​K​​R​​I​​T​​G​​I​​N​​D​670  ​P​​R​​L​​R​​N​​P​​S​​D​​K​​F​680  ​I​​Y​​A​​T​​V​​K​​Q​​S​​S​​V​690  ​D​​I​​Y​​F​​R​​R​​Q​​V​​E​​L​700  ​S​​T​​M​​Y​​R​​H​​M​​E​​K​​H​710  ​N​​Y​​E​​S​​A​​A​​E​​A​​I​​Q​720  ​A​​V​​R​​D​​N​​K​​L​​H​​A​​F​730  ​I​​W​​D​​S​​A​​V​​L​​E​​F​​E​740  ​A​​S​​Q​​K​​C​​D​​L​​V​​T​​T​750  ​G​​E​​L​​F​​F​​R​​S​​G​​F​​G​760  ​I​​G​​M​​R​​K​​D​​S​​P​​W​​K​770  ​Q​​N​​V​​S​​L​​S​​I​​L​​K​​S​780  ​H​​E​​N​​G​​F​​M​​E​​D​​L​​D​790  ​K​​T​​W​​V​​R​​Y​​Q​​E​
colorbar

DAQ Score Table

Score range in the table: -1.06 .. 0.95
-1.06
0.95
#
Residue identifier
Residue name
DAQscore[SS]
1
25
LYS
-1.06
2
26
ILE
-0.96
3
27
VAL
-0.87
4
28
ASN
-0.79
5
29
ILE
-0.73
6
30
GLY
-0.64
7
31
ALA
-0.56
8
32
VAL
-0.48
9
33
LEU
-0.41
10
34
SER
-0.35
11
35
THR
-0.28
12
36
ARG
-0.12
13
37
LYS
0.05
14
38
HIS
0.24
15
39
GLU
0.35
16
40
GLN
0.42
17
41
MET
0.45
18
42
PHE
0.46
19
43
ARG
0.46
20
44
GLU
0.49
21
45
ALA
0.51
22
46
VAL
0.52
23
47
ASN
0.51
24
48
GLN
0.50
25
49
ALA
0.40
26
50
ASN
0.26
27
51
LYS
0.04
28
52
ARG
-0.18
29
53
HIS
-0.34
30
54
GLY
-0.48
31
55
SER
-0.54
32
56
TRP
-0.59
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -1.26 .. 2.35
-1.26
2.35
#
Residue identifier
Residue name
DAQscore[Total]
1
25
LYS
-1.26
2
26
ILE
-1.13
3
27
VAL
-1.01
4
28
ASN
-0.89
5
29
ILE
-0.77
6
30
GLY
-0.68
7
31
ALA
-0.58
8
32
VAL
-0.48
9
33
LEU
-0.44
10
34
SER
-0.37
11
35
THR
-0.29
12
36
ARG
-0.08
13
37
LYS
0.12
14
38
HIS
0.37
15
39
GLU
0.58
16
40
GLN
0.76
17
41
MET
0.73
18
42
PHE
0.76
19
43
ARG
0.77
20
44
GLU
0.88
21
45
ALA
0.91
22
46
VAL
0.88
23
47
ASN
0.91
24
48
GLN
0.85
25
49
ALA
0.74
26
50
ASN
0.58
27
51
LYS
0.37
28
52
ARG
0.13
29
53
HIS
0.00
30
54
GLY
-0.18
31
55
SER
-0.32
32
56
TRP
-0.43