28034 8EDG I v1-1
28034_8edg_I_v1-1
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RCSB PDB: 8EDG
EMDB: 28034
Structure title Cryo-EM structure of the Hermes transposase bound to two left-ends of its DNA transposon
Method ELECTRON MICROSCOPY
Resolution 4.64 Å
Source organism Musca domestica
3D View
Download PDB file DAQ[AA]
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DAQ Score Table

Score range in the table: -0.18 .. 0.19
-0.18
0.19
#
Residue identifier
Residue name
DAQscore[AA]
1
4
MET
0.00
2
5
ASP
0.03
3
6
ASN
0.03
4
7
LEU
0.07
5
8
GLU
0.00
6
9
VAL
0.04
7
10
LYS
0.03
8
11
ALA
-0.01
9
12
LYS
0.00
10
13
ILE
0.02
11
14
ASN
0.05
12
15
GLN
0.06
13
16
GLY
0.05
14
17
LEU
0.07
15
18
TYR
-0.05
16
19
LYS
-0.14
17
20
ILE
-0.16
18
21
THR
-0.18
19
22
PRO
-0.14
20
23
ARG
-0.11
21
24
HIS
-0.12
22
25
LYS
-0.11
23
26
GLY
-0.11
24
27
THR
-0.06
25
28
SER
-0.08
26
29
PHE
-0.06
27
30
ILE
-0.03
28
31
TRP
-0.01
29
32
ASN
-0.01
30
33
VAL
-0.02
31
34
LEU
-0.02
32
35
ALA
-0.02
3D View
Download PDB file DAQ[Cα]
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DAQ Score Table

Score range in the table: -0.41 .. 0.37
-0.41
0.37
#
Residue identifier
Residue name
DAQscore[ATOM]
1
4
MET
0.28
2
5
ASP
0.26
3
6
ASN
0.22
4
7
LEU
0.23
5
8
GLU
0.23
6
9
VAL
0.28
7
10
LYS
0.27
8
11
ALA
0.26
9
12
LYS
0.26
10
13
ILE
0.24
11
14
ASN
0.30
12
15
GLN
0.25
13
16
GLY
0.22
14
17
LEU
0.21
15
18
TYR
0.04
16
19
LYS
-0.07
17
20
ILE
-0.05
18
21
THR
-0.03
19
22
PRO
-0.08
20
23
ARG
-0.08
21
24
HIS
-0.12
22
25
LYS
-0.15
23
26
GLY
-0.14
24
27
THR
-0.15
25
28
SER
-0.17
26
29
PHE
-0.17
27
30
ILE
-0.17
28
31
TRP
-0.26
29
32
ASN
-0.34
30
33
VAL
-0.41
31
34
LEU
-0.39
32
35
ALA
-0.37
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
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DAQ Score Table

Score range in the table: -0.16 .. 0.24
-0.16
0.24
#
Residue identifier
Residue name
DAQscore[SS]
1
4
MET
0.09
2
5
ASP
0.05
3
6
ASN
0.02
4
7
LEU
0.04
5
8
GLU
0.05
6
9
VAL
0.03
7
10
LYS
0.01
8
11
ALA
0.00
9
12
LYS
0.01
10
13
ILE
0.01
11
14
ASN
0.02
12
15
GLN
0.00
13
16
GLY
0.01
14
17
LEU
0.00
15
18
TYR
0.00
16
19
LYS
-0.04
17
20
ILE
-0.06
18
21
THR
0.02
19
22
PRO
0.04
20
23
ARG
0.07
21
24
HIS
0.09
22
25
LYS
0.03
23
26
GLY
-0.04
24
27
THR
-0.06
25
28
SER
-0.02
26
29
PHE
-0.01
27
30
ILE
0.01
28
31
TRP
0.01
29
32
ASN
0.00
30
33
VAL
-0.02
31
34
LEU
-0.02
32
35
ALA
-0.04
3D View
Download PDB file DAQ[Total]
Render Map
colorbar

DAQ Score Table