30598 7D6Z 0 v1-1
30598_7d6z_0_v1-1
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RCSB PDB: 7D6Z
EMDB: 30598
Structure title Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factor
Method ELECTRON MICROSCOPY
Resolution 3.4 Å
Source organism Escherichia coli
3D View
Download PDB file DAQ[AA]
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DAQ Score Table

Score range in the table: 0.13 .. 0.74
0.13
0.74
#
Residue identifier
Residue name
DAQscore[AA]
1
3
ASN
0.20
2
4
ILE
0.14
3
5
LYS
0.21
4
6
SER
0.25
5
7
ALA
0.20
6
8
LYS
0.32
7
9
LYS
0.31
8
10
ARG
0.36
9
11
ALA
0.36
10
12
ILE
0.32
11
13
GLN
0.35
12
14
SER
0.43
13
15
GLU
0.37
14
16
LYS
0.34
15
17
ALA
0.28
16
18
ARG
0.36
17
19
LYS
0.39
18
20
HIS
0.29
19
21
ASN
0.36
20
22
ALA
0.41
21
23
SER
0.49
22
24
ARG
0.45
23
25
ARG
0.42
24
26
SER
0.51
25
27
MET
0.41
26
28
MET
0.42
27
29
ARG
0.41
28
30
THR
0.39
29
31
PHE
0.44
30
32
ILE
0.36
31
33
LYS
0.41
32
34
LYS
0.54
3D View
Download PDB file DAQ[Cα]
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DAQ Score Table

Score range in the table: 0.17 .. 0.93
0.17
0.93
#
Residue identifier
Residue name
DAQscore[ATOM]
1
3
ASN
0.54
2
4
ILE
0.60
3
5
LYS
0.58
4
6
SER
0.58
5
7
ALA
0.55
6
8
LYS
0.60
7
9
LYS
0.61
8
10
ARG
0.65
9
11
ALA
0.69
10
12
ILE
0.71
11
13
GLN
0.79
12
14
SER
0.78
13
15
GLU
0.79
14
16
LYS
0.77
15
17
ALA
0.78
16
18
ARG
0.88
17
19
LYS
0.93
18
20
HIS
0.80
19
21
ASN
0.84
20
22
ALA
0.88
21
23
SER
0.84
22
24
ARG
0.82
23
25
ARG
0.81
24
26
SER
0.77
25
27
MET
0.77
26
28
MET
0.76
27
29
ARG
0.73
28
30
THR
0.71
29
31
PHE
0.62
30
32
ILE
0.55
31
33
LYS
0.54
32
34
LYS
0.54
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
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DAQ Score Table

Score range in the table: -0.25 .. 0.38
-0.25
0.38
#
Residue identifier
Residue name
DAQscore[SS]
1
3
ASN
-0.25
2
4
ILE
-0.20
3
5
LYS
-0.16
4
6
SER
-0.12
5
7
ALA
-0.09
6
8
LYS
-0.06
7
9
LYS
-0.04
8
10
ARG
-0.01
9
11
ALA
0.01
10
12
ILE
0.02
11
13
GLN
0.02
12
14
SER
0.05
13
15
GLU
0.20
14
16
LYS
0.28
15
17
ALA
0.29
16
18
ARG
0.29
17
19
LYS
0.32
18
20
HIS
0.32
19
21
ASN
0.35
20
22
ALA
0.35
21
23
SER
0.36
22
24
ARG
0.37
23
25
ARG
0.37
24
26
SER
0.38
25
27
MET
0.38
26
28
MET
0.37
27
29
ARG
0.35
28
30
THR
0.33
29
31
PHE
0.27
30
32
ILE
0.26
31
33
LYS
0.29
32
34
LYS
0.32
3D View
Download PDB file DAQ[Total]
Render Map
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DAQ Score Table