30663 7DFG C v1-1
30663_7dfg_C_v1-1
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RCSB PDB: 7DFG
EMDB: 30663
Structure title Structure of COVID-19 RNA-dependent RNA polymerase bound to favipiravir
Method ELECTRON MICROSCOPY
Resolution 2.7 Å
Source organism Severe acute respiratory syndrome coronavirus 2
3D View
Download PDB file DAQ[AA]
Render Map
Sequence of
2    ​K​​M​​S​​D​​V​​K​​C​​T​​S​​V​12   ​V​​L​​L​​S​​V​​L​​Q​​Q​​L​​R​22   ​V​​E​​S​​S​​S​​K​​L​​W​​A​​Q​32   ​C​​V​​Q​​L​​H​​N​​D​​I​​L​​L​42   ​A​​K​​D​​T​​T​​E​​A​​F​​E​​K​52   ​M​​V​​S​​L​​L​​S​​V​​L​​L​​S​62   ​M​​Q​​G​​A​​V​​D​​I​​N​​K​
colorbar

DAQ Score Table

Score range in the table: 0.03 .. 1.29
0.03
1.29
#
Residue identifier
Residue name
DAQscore[AA]
1
2
LYS
0.85
2
3
MET
0.83
3
4
SER
0.85
4
5
ASP
0.88
5
6
VAL
0.91
6
7
LYS
0.97
7
8
CYS
1.00
8
9
THR
1.00
9
10
SER
0.99
10
11
VAL
0.97
11
12
VAL
0.97
12
13
LEU
0.97
13
14
LEU
0.98
14
15
SER
0.91
15
16
VAL
0.88
16
17
LEU
1.00
17
18
GLN
0.95
18
19
GLN
0.99
19
20
LEU
1.06
20
21
ARG
1.01
21
22
VAL
1.05
22
23
GLU
1.07
23
24
SER
1.01
24
25
SER
1.03
25
26
SER
0.95
26
27
LYS
0.90
27
28
LEU
0.84
28
29
TRP
0.88
29
30
ALA
0.93
30
31
GLN
0.98
31
32
CYS
0.88
32
33
VAL
0.78
3D View
Download PDB file DAQ[Cα]
Render Map
Sequence of
2    ​K​​M​​S​​D​​V​​K​​C​​T​​S​​V​12   ​V​​L​​L​​S​​V​​L​​Q​​Q​​L​​R​22   ​V​​E​​S​​S​​S​​K​​L​​W​​A​​Q​32   ​C​​V​​Q​​L​​H​​N​​D​​I​​L​​L​42   ​A​​K​​D​​T​​T​​E​​A​​F​​E​​K​52   ​M​​V​​S​​L​​L​​S​​V​​L​​L​​S​62   ​M​​Q​​G​​A​​V​​D​​I​​N​​K​
colorbar

DAQ Score Table

Score range in the table: 0.71 .. 1.08
0.71
1.08
#
Residue identifier
Residue name
DAQscore[ATOM]
1
2
LYS
0.78
2
3
MET
0.85
3
4
SER
0.87
4
5
ASP
0.94
5
6
VAL
1.00
6
7
LYS
1.02
7
8
CYS
1.07
8
9
THR
1.03
9
10
SER
0.88
10
11
VAL
0.92
11
12
VAL
0.86
12
13
LEU
0.81
13
14
LEU
0.80
14
15
SER
0.78
15
16
VAL
0.77
16
17
LEU
0.90
17
18
GLN
0.95
18
19
GLN
0.97
19
20
LEU
1.06
20
21
ARG
0.96
21
22
VAL
0.98
22
23
GLU
1.00
23
24
SER
0.94
24
25
SER
0.94
25
26
SER
0.90
26
27
LYS
0.81
27
28
LEU
0.79
28
29
TRP
0.96
29
30
ALA
0.96
30
31
GLN
1.06
31
32
CYS
1.07
32
33
VAL
0.92
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Sequence of
2    ​K​​M​​S​​D​​V​​K​​C​​T​​S​​V​12   ​V​​L​​L​​S​​V​​L​​Q​​Q​​L​​R​22   ​V​​E​​S​​S​​S​​K​​L​​W​​A​​Q​32   ​C​​V​​Q​​L​​H​​N​​D​​I​​L​​L​42   ​A​​K​​D​​T​​T​​E​​A​​F​​E​​K​52   ​M​​V​​S​​L​​L​​S​​V​​L​​L​​S​62   ​M​​Q​​G​​A​​V​​D​​I​​N​​K​
colorbar

DAQ Score Table

Score range in the table: 0.16 .. 0.41
0.16
0.41
#
Residue identifier
Residue name
DAQscore[SS]
1
2
LYS
0.25
2
3
MET
0.25
3
4
SER
0.27
4
5
ASP
0.28
5
6
VAL
0.28
6
7
LYS
0.29
7
8
CYS
0.29
8
9
THR
0.29
9
10
SER
0.29
10
11
VAL
0.29
11
12
VAL
0.35
12
13
LEU
0.36
13
14
LEU
0.33
14
15
SER
0.33
15
16
VAL
0.32
16
17
LEU
0.31
17
18
GLN
0.30
18
19
GLN
0.29
19
20
LEU
0.29
20
21
ARG
0.27
21
22
VAL
0.27
22
23
GLU
0.27
23
24
SER
0.27
24
25
SER
0.27
25
26
SER
0.27
26
27
LYS
0.27
27
28
LEU
0.28
28
29
TRP
0.29
29
30
ALA
0.29
30
31
GLN
0.25
31
32
CYS
0.23
32
33
VAL
0.27
3D View
Download PDB file DAQ[Total]
Render Map
Sequence of
2    ​K​​M​​S​​D​​V​​K​​C​​T​​S​​V​12   ​V​​L​​L​​S​​V​​L​​Q​​Q​​L​​R​22   ​V​​E​​S​​S​​S​​K​​L​​W​​A​​Q​32   ​C​​V​​Q​​L​​H​​N​​D​​I​​L​​L​42   ​A​​K​​D​​T​​T​​E​​A​​F​​E​​K​52   ​M​​V​​S​​L​​L​​S​​V​​L​​L​​S​62   ​M​​Q​​G​​A​​V​​D​​I​​N​​K​
colorbar

DAQ Score Table

Score range in the table: 0.90 .. 2.74
0.90
2.74
#
Residue identifier
Residue name
DAQscore[Total]
1
2
LYS
1.88
2
3
MET
1.93
3
4
SER
1.99
4
5
ASP
2.10
5
6
VAL
2.19
6
7
LYS
2.28
7
8
CYS
2.36
8
9
THR
2.33
9
10
SER
2.16
10
11
VAL
2.18
11
12
VAL
2.18
12
13
LEU
2.14
13
14
LEU
2.11
14
15
SER
2.03
15
16
VAL
1.98
16
17
LEU
2.21
17
18
GLN
2.20
18
19
GLN
2.26
19
20
LEU
2.41
20
21
ARG
2.24
21
22
VAL
2.29
22
23
GLU
2.34
23
24
SER
2.22
24
25
SER
2.24
25
26
SER
2.12
26
27
LYS
1.98
27
28
LEU
1.91
28
29
TRP
2.13
29
30
ALA
2.18
30
31
GLN
2.29
31
32
CYS
2.17
32
33
VAL
1.97