30794 7DOI B v1-1
30794_7doi_B_v1-1
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RCSB PDB: 7DOI
EMDB: 30794
Structure title Structure of COVID-19 RNA-dependent RNA polymerase bound to penciclovir.
Method ELECTRON MICROSCOPY
Resolution 2.6 Å
Source organism Severe acute respiratory syndrome coronavirus 2
3D View
Download PDB file DAQ[AA]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.36 .. 1.25
0.36
1.25
#
Residue identifier
Residue name
DAQscore[AA]
1
78
ASP
1.19
2
79
LYS
1.18
3
80
ARG
1.08
4
81
ALA
0.96
5
82
LYS
1.02
6
83
VAL
0.95
7
84
THR
0.93
8
85
SER
0.91
9
86
ALA
0.82
10
87
MET
0.81
11
88
GLN
0.78
12
89
THR
0.74
13
90
MET
0.68
14
91
LEU
0.53
15
92
PHE
0.47
16
93
THR
0.46
17
94
MET
0.58
18
95
LEU
0.50
19
96
ARG
0.43
20
97
LYS
0.39
21
98
LEU
0.42
22
99
ASP
0.42
23
100
ASN
0.45
24
101
ASP
0.39
25
102
ALA
0.39
26
103
LEU
0.36
27
104
ASN
0.36
28
105
ASN
0.41
29
106
ILE
0.48
30
107
ILE
0.52
31
108
ASN
0.60
32
109
ASN
0.68
3D View
Download PDB file DAQ[Cα]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.18 .. 1.13
0.18
1.13
#
Residue identifier
Residue name
DAQscore[ATOM]
1
78
ASP
0.95
2
79
LYS
1.01
3
80
ARG
1.05
4
81
ALA
1.10
5
82
LYS
1.13
6
83
VAL
1.06
7
84
THR
0.89
8
85
SER
0.92
9
86
ALA
0.84
10
87
MET
0.86
11
88
GLN
0.90
12
89
THR
0.91
13
90
MET
0.83
14
91
LEU
0.78
15
92
PHE
0.74
16
93
THR
0.71
17
94
MET
0.68
18
95
LEU
0.72
19
96
ARG
0.75
20
97
LYS
0.72
21
98
LEU
0.73
22
99
ASP
0.65
23
100
ASN
0.60
24
101
ASP
0.52
25
102
ALA
0.57
26
103
LEU
0.72
27
104
ASN
0.72
28
105
ASN
0.81
29
106
ILE
0.83
30
107
ILE
0.77
31
108
ASN
0.81
32
109
ASN
0.84
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Sequence of
78   ​D​​K​​R​​A​​K​​V​​T​​S​​A​​M​88   ​Q​​T​​M​​L​​F​​T​​M​​L​​R​​K​98   ​L​​D​​N​​D​​A​​L​​N​​N​​I​​I​108  ​N​​N​​A​​R​​D​​G​​C​​V​​P​​L​118  ​N​​I​​I​​P​​L​​T​​T​​A​​A​​K​128  ​L​​M​​V​​V​​I​​P​​D​​Y​​N​​T​138  ​Y​​K​​N​​T​​C​​D​​G​​T​​T​​F​148  ​T​​Y​​A​​S​​A​​L​​W​​E​​I​​Q​158  ​Q​​V​​V​​D​​A​​D​​S​​K​​I​​V​168  ​Q​​L​​S​​E​​I​​S​​M​​D​​N​​S​178  ​P​​N​​L​​A​​W​​P​​L​​I​​V​​T​188  ​A​​L​​R​​A​
colorbar

DAQ Score Table

Score range in the table: -0.33 .. 0.99
-0.33
0.99
#
Residue identifier
Residue name
DAQscore[SS]
1
78
ASP
0.91
2
79
LYS
0.93
3
80
ARG
0.95
4
81
ALA
0.96
5
82
LYS
0.97
6
83
VAL
0.98
7
84
THR
0.99
8
85
SER
0.99
9
86
ALA
0.97
10
87
MET
0.94
11
88
GLN
0.93
12
89
THR
0.91
13
90
MET
0.91
14
91
LEU
0.82
15
92
PHE
0.76
16
93
THR
0.72
17
94
MET
0.72
18
95
LEU
0.72
19
96
ARG
0.71
20
97
LYS
0.71
21
98
LEU
0.69
22
99
ASP
0.62
23
100
ASN
0.57
24
101
ASP
0.51
25
102
ALA
0.41
26
103
LEU
0.35
27
104
ASN
0.30
28
105
ASN
0.28
29
106
ILE
0.27
30
107
ILE
0.26
31
108
ASN
0.25
32
109
ASN
0.23
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 1.19 .. 3.13
1.19
3.13
#
Residue identifier
Residue name
DAQscore[Total]
1
78
ASP
3.05
2
79
LYS
3.11
3
80
ARG
3.07
4
81
ALA
3.02
5
82
LYS
3.13
6
83
VAL
2.99
7
84
THR
2.81
8
85
SER
2.81
9
86
ALA
2.64
10
87
MET
2.61
11
88
GLN
2.61
12
89
THR
2.56
13
90
MET
2.41
14
91
LEU
2.13
15
92
PHE
1.97
16
93
THR
1.89
17
94
MET
1.97
18
95
LEU
1.94
19
96
ARG
1.90
20
97
LYS
1.83
21
98
LEU
1.84
22
99
ASP
1.69
23
100
ASN
1.62
24
101
ASP
1.43
25
102
ALA
1.36
26
103
LEU
1.44
27
104
ASN
1.38
28
105
ASN
1.51
29
106
ILE
1.59
30
107
ILE
1.55
31
108
ASN
1.66
32
109
ASN
1.75