31074 7EH5 J v1-1
Structure title Cryo-EM structure of SARS-CoV-2 S-D614G variant in complex with neutralizing antibodies, RBD-chAb15 and RBD-chAb45
Method ELECTRON MICROSCOPY
Resolution 4.0 Å
Source organism Homo sapiens

Converting to mmCIF
SequenceNo structure available
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DAQ Score Table

Score range in the table: -0.11 .. 0.14
-0.11
0.14
#
Residue identifier
Residue name
DAQscore[AA]
1
1
GLU
-0.11
2
2
VAL
-0.10
3
3
GLN
-0.08
4
4
LEU
-0.08
5
5
GLN
-0.06
6
6
GLN
-0.03
7
7
SER
-0.01
8
8
GLY
0.00
9
9
PRO
-0.01
10
10
GLU
0.02
11
11
LEU
0.03
12
12
VAL
0.06
13
13
LYS
0.07
14
14
PRO
0.08
15
15
GLY
0.08
16
16
ALA
0.05
17
17
SER
0.10
18
18
VAL
0.06
19
19
LYS
0.07
20
20
ILE
0.11
21
21
SER
0.12
22
22
CYS
0.13
23
23
LYS
0.14
24
24
THR
0.12
25
25
SER
0.12
26
26
GLY
0.11
27
27
TYR
0.07
28
28
THR
0.09
29
29
PHE
0.07
30
30
THR
0.06
31
31
GLU
0.03
32
32
TYR
0.01
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0 .. 0.12
0
0.12
#
Residue identifier
Residue name
DAQscore[ATOM]
1
1
GLU
0.08
2
2
VAL
0.09
3
3
GLN
0.11
4
4
LEU
0.12
5
5
GLN
0.12
6
6
GLN
0.11
7
7
SER
0.09
8
8
GLY
0.10
9
9
PRO
0.09
10
10
GLU
0.10
11
11
LEU
0.12
12
12
VAL
0.12
13
13
LYS
0.12
14
14
PRO
0.12
15
15
GLY
0.12
16
16
ALA
0.09
17
17
SER
0.11
18
18
VAL
0.11
19
19
LYS
0.10
20
20
ILE
0.10
21
21
SER
0.10
22
22
CYS
0.09
23
23
LYS
0.08
24
24
THR
0.08
25
25
SER
0.09
26
26
GLY
0.11
27
27
TYR
0.11
28
28
THR
0.12
29
29
PHE
0.12
30
30
THR
0.09
31
31
GLU
0.07
32
32
TYR
0.06
Sequence of
1    ​E​​V​​Q​​L​​Q​​Q​​S​​G​​P​​E​11   ​L​​V​​K​​P​​G​​A​​S​​V​​K​​I​21   ​S​​C​​K​​T​​S​​G​​Y​​T​​F​​T​31   ​E​​Y​​T​​I​​Y​​W​​V​​K​​Q​​S​41   ​L​​G​​K​​S​​L​​E​​W​​I​​G​​G​51   ​N​​N​​P​​N​​N​​D​​D​​T​​T​​Y​61   ​K​​Q​​F​​F​​K​​G​​K​​A​​T​​L​71   ​T​​V​​D​​K​​S​​S​​S​​T​​A​​Y​81   ​M​​E​​L​​R​​S​​L​​T​​S​​E​​D​91   ​S​​A​​V​​Y​​Y​​C​​A​​R​​D​​G​101  ​Y​​P​​Y​​Y​​Y​​A​​L​​D​​F​​W​111  ​G​​Q​​G​​T​​S​​V​​T​​V​​S​​S​
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DAQ Score Table

Score range in the table: -0.67 .. 0.24
-0.67
0.24
#
Residue identifier
Residue name
DAQscore[SS]
1
1
GLU
-0.45
2
2
VAL
-0.48
3
3
GLN
-0.67
4
4
LEU
-0.62
5
5
GLN
-0.56
6
6
GLN
-0.50
7
7
SER
-0.47
8
8
GLY
-0.45
9
9
PRO
-0.46
10
10
GLU
-0.49
11
11
LEU
-0.51
12
12
VAL
-0.47
13
13
LYS
-0.45
14
14
PRO
-0.43
15
15
GLY
-0.42
16
16
ALA
-0.44
17
17
SER
-0.41
18
18
VAL
-0.39
19
19
LYS
-0.36
20
20
ILE
-0.27
21
21
SER
-0.22
22
22
CYS
-0.07
23
23
LYS
-0.07
24
24
THR
-0.06
25
25
SER
-0.08
26
26
GLY
-0.11
27
27
TYR
-0.12
28
28
THR
-0.06
29
29
PHE
-0.01
30
30
THR
0.00
31
31
GLU
-0.01
32
32
TYR
0.01
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.64 .. 0.28
-0.64
0.28
#
Residue identifier
Residue name
DAQscore[Total]
1
1
GLU
-0.48
2
2
VAL
-0.48
3
3
GLN
-0.64
4
4
LEU
-0.58
5
5
GLN
-0.50
6
6
GLN
-0.42
7
7
SER
-0.39
8
8
GLY
-0.35
9
9
PRO
-0.38
10
10
GLU
-0.38
11
11
LEU
-0.37
12
12
VAL
-0.28
13
13
LYS
-0.26
14
14
PRO
-0.23
15
15
GLY
-0.22
16
16
ALA
-0.29
17
17
SER
-0.20
18
18
VAL
-0.22
19
19
LYS
-0.20
20
20
ILE
-0.06
21
21
SER
0.00
22
22
CYS
0.14
23
23
LYS
0.15
24
24
THR
0.14
25
25
SER
0.14
26
26
GLY
0.11
27
27
TYR
0.07
28
28
THR
0.15
29
29
PHE
0.18
30
30
THR
0.16
31
31
GLU
0.10
32
32
TYR
0.08