34133 7YVN I v1-0
34133_7yvn_I_v1-0
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RCSB PDB: 7YVN
EMDB: 34133
Structure title Omicron BA.4/5 SARS-CoV-2 S in complex with TH281 Fab
Method ELECTRON MICROSCOPY
Resolution 3.4 Å
Source organism Homo sapiens
3D View
Download PDB file DAQ[AA]
Render Map
Sequence of
1    ​E​​V​​Q​​L​​V​​E​​S​​G​​G​​G​11   ​L​​V​​Q​​P​​G​​G​​S​​L​​R​​L​21   ​S​​C​​A​​A​​S​​E​​I​​T​​V​​S​31   ​R​​N​​Y​​M​​S​​W​​V​​R​​Q​​A​41   ​P​​G​​K​​G​​L​​E​​W​​V​​S​​V​51   ​M​​F​​A​​G​​G​​S​​T​​F​​Y​​A​61   ​D​​S​​V​​K​​G​​R​​F​​T​​I​​S​71   ​R​​D​​N​​S​​K​​N​​T​​L​​Y​​L​81   ​Q​​M​​N​​S​​L​​R​​A​​E​​D​​T​91   ​A​​V​​Y​​Y​​C​​A​​R​​D​​L​​G​101  ​V​​V​​G​​A​​T​​D​​Y​​W​​G​​Q​111  ​G​​T​​L​​V​​T​​V​​S​​S​
colorbar

DAQ Score Table

Score range in the table: -0.20 .. 0.16
-0.20
0.16
#
Residue identifier
Residue name
DAQscore[AA]
1
1
GLU
-0.14
2
2
VAL
-0.17
3
3
GLN
-0.20
4
4
LEU
-0.16
5
5
VAL
-0.12
6
6
GLU
-0.08
7
7
SER
-0.04
8
8
GLY
-0.02
9
9
GLY
-0.04
10
10
GLY
-0.07
11
11
LEU
-0.02
12
12
VAL
-0.06
13
13
GLN
-0.02
14
14
PRO
-0.05
15
15
GLY
-0.08
16
16
GLY
-0.06
17
17
SER
-0.07
18
18
LEU
-0.02
19
19
ARG
-0.01
20
20
LEU
0.00
21
21
SER
0.01
22
22
CYS
-0.01
23
23
ALA
-0.05
24
24
ALA
-0.07
25
25
SER
-0.07
26
26
GLU
-0.12
27
27
ILE
-0.18
28
28
THR
-0.14
29
29
VAL
-0.13
30
30
SER
-0.15
31
31
ARG
-0.13
32
32
ASN
-0.14
3D View
Download PDB file DAQ[Cα]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.27 .. 0.17
-0.27
0.17
#
Residue identifier
Residue name
DAQscore[ATOM]
1
1
GLU
-0.17
2
2
VAL
-0.13
3
3
GLN
-0.10
4
4
LEU
-0.08
5
5
VAL
-0.05
6
6
GLU
-0.03
7
7
SER
-0.02
8
8
GLY
0.00
9
9
GLY
0.01
10
10
GLY
0.01
11
11
LEU
0.00
12
12
VAL
0.00
13
13
GLN
0.00
14
14
PRO
-0.01
15
15
GLY
0.00
16
16
GLY
0.00
17
17
SER
0.00
18
18
LEU
0.00
19
19
ARG
-0.02
20
20
LEU
-0.06
21
21
SER
-0.08
22
22
CYS
-0.08
23
23
ALA
-0.11
24
24
ALA
-0.15
25
25
SER
-0.17
26
26
GLU
-0.19
27
27
ILE
-0.23
28
28
THR
-0.25
29
29
VAL
-0.27
30
30
SER
-0.22
31
31
ARG
-0.19
32
32
ASN
-0.16
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.85 .. 0.23
-0.85
0.23
#
Residue identifier
Residue name
DAQscore[SS]
1
1
GLU
-0.25
2
2
VAL
-0.38
3
3
GLN
-0.43
4
4
LEU
-0.37
5
5
VAL
-0.32
6
6
GLU
-0.27
7
7
SER
-0.24
8
8
GLY
-0.28
9
9
GLY
-0.41
10
10
GLY
-0.46
11
11
LEU
-0.41
12
12
VAL
-0.42
13
13
GLN
-0.35
14
14
PRO
-0.34
15
15
GLY
-0.33
16
16
GLY
-0.35
17
17
SER
-0.36
18
18
LEU
-0.35
19
19
ARG
-0.33
20
20
LEU
-0.27
21
21
SER
-0.19
22
22
CYS
-0.15
23
23
ALA
-0.19
24
24
ALA
-0.22
25
25
SER
-0.19
26
26
GLU
-0.15
27
27
ILE
-0.04
28
28
THR
0.14
29
29
VAL
0.23
30
30
SER
0.15
31
31
ARG
0.14
32
32
ASN
0.13
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.75 .. 0.04
-0.75
0.04
#
Residue identifier
Residue name
DAQscore[Total]
1
1
GLU
-0.56
2
2
VAL
-0.68
3
3
GLN
-0.73
4
4
LEU
-0.62
5
5
VAL
-0.49
6
6
GLU
-0.38
7
7
SER
-0.31
8
8
GLY
-0.31
9
9
GLY
-0.44
10
10
GLY
-0.52
11
11
LEU
-0.43
12
12
VAL
-0.48
13
13
GLN
-0.37
14
14
PRO
-0.39
15
15
GLY
-0.41
16
16
GLY
-0.41
17
17
SER
-0.42
18
18
LEU
-0.37
19
19
ARG
-0.36
20
20
LEU
-0.33
21
21
SER
-0.26
22
22
CYS
-0.24
23
23
ALA
-0.35
24
24
ALA
-0.44
25
25
SER
-0.43
26
26
GLU
-0.45
27
27
ILE
-0.44
28
28
THR
-0.25
29
29
VAL
-0.17
30
30
SER
-0.22
31
31
ARG
-0.18
32
32
ASN
-0.18