34133 7YVN N v1-0
Structure title Omicron BA.4/5 SARS-CoV-2 S in complex with TH281 Fab
Method ELECTRON MICROSCOPY
Resolution 3.4 Å
Source organism Homo sapiens

Sequence of
1    ​E​​I​​V​​M​​T​​Q​​S​​P​​A​​T​11   ​L​​S​​V​​S​​P​​G​​E​​R​​A​​T​21   ​L​​S​​C​​R​​A​​S​​Q​​S​​V​​S​31   ​S​​D​​L​​A​​W​​Y​​Q​​Q​​K​​P​41   ​G​​Q​​A​​P​​R​​L​​L​​I​​Y​​G​51   ​A​​S​​T​​R​​A​​T​​G​​I​​P​​A​61   ​R​​F​​S​​G​​S​​G​​S​​G​​T​​E​71   ​F​​T​​L​​T​​I​​S​​S​​L​​Q​​S​81   ​E​​D​​S​​A​​V​​Y​​Y​​C​​Q​​Q​91   ​Y​​N​​N​​W​​P​​P​​G​​Y​​T​​F​101  ​G​​Q​​G​​T​​K​​L​​E​​I​​K​
colorbar

DAQ Score Table

Score range in the table: -0.31 .. 0.16
-0.31
0.16
#
Residue identifier
Residue name
DAQscore[AA]
1
1
GLU
-0.01
2
2
ILE
-0.02
3
3
VAL
0.01
4
4
MET
-0.01
5
5
THR
-0.02
6
6
GLN
-0.01
7
7
SER
-0.02
8
8
PRO
-0.01
9
9
ALA
-0.01
10
10
THR
0.02
11
11
LEU
-0.01
12
12
SER
-0.02
13
13
VAL
0.03
14
14
SER
0.03
15
15
PRO
0.02
16
16
GLY
0.00
17
17
GLU
0.03
18
18
ARG
0.05
19
19
ALA
0.06
20
20
THR
0.08
21
21
LEU
0.06
22
22
SER
0.03
23
23
CYS
0.04
24
24
ARG
0.06
25
25
ALA
0.05
26
26
SER
0.05
27
27
GLN
0.04
28
28
SER
0.05
29
29
VAL
0.02
30
30
SER
0.06
31
31
SER
0.06
32
32
ASP
0.03
Sequence of
1    ​E​​I​​V​​M​​T​​Q​​S​​P​​A​​T​11   ​L​​S​​V​​S​​P​​G​​E​​R​​A​​T​21   ​L​​S​​C​​R​​A​​S​​Q​​S​​V​​S​31   ​S​​D​​L​​A​​W​​Y​​Q​​Q​​K​​P​41   ​G​​Q​​A​​P​​R​​L​​L​​I​​Y​​G​51   ​A​​S​​T​​R​​A​​T​​G​​I​​P​​A​61   ​R​​F​​S​​G​​S​​G​​S​​G​​T​​E​71   ​F​​T​​L​​T​​I​​S​​S​​L​​Q​​S​81   ​E​​D​​S​​A​​V​​Y​​Y​​C​​Q​​Q​91   ​Y​​N​​N​​W​​P​​P​​G​​Y​​T​​F​101  ​G​​Q​​G​​T​​K​​L​​E​​I​​K​
colorbar

DAQ Score Table

Score range in the table: -0.19 .. 0.19
-0.19
0.19
#
Residue identifier
Residue name
DAQscore[ATOM]
1
1
GLU
0.11
2
2
ILE
0.07
3
3
VAL
0.09
4
4
MET
0.10
5
5
THR
0.11
6
6
GLN
0.11
7
7
SER
0.08
8
8
PRO
0.09
9
9
ALA
0.08
10
10
THR
0.06
11
11
LEU
0.04
12
12
SER
0.04
13
13
VAL
0.04
14
14
SER
0.04
15
15
PRO
0.04
16
16
GLY
0.04
17
17
GLU
0.02
18
18
ARG
0.03
19
19
ALA
0.05
20
20
THR
0.06
21
21
LEU
0.06
22
22
SER
0.04
23
23
CYS
0.04
24
24
ARG
0.04
25
25
ALA
0.03
26
26
SER
0.07
27
27
GLN
0.07
28
28
SER
0.09
29
29
VAL
0.11
30
30
SER
0.13
31
31
SER
0.11
32
32
ASP
0.07
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.53 .. 0.03
-0.53
0.03
#
Residue identifier
Residue name
DAQscore[SS]
1
1
GLU
-0.27
2
2
ILE
-0.36
3
3
VAL
-0.39
4
4
MET
-0.38
5
5
THR
-0.36
6
6
GLN
-0.33
7
7
SER
-0.31
8
8
PRO
-0.29
9
9
ALA
-0.32
10
10
THR
-0.38
11
11
LEU
-0.50
12
12
SER
-0.52
13
13
VAL
-0.51
14
14
SER
-0.53
15
15
PRO
-0.52
16
16
GLY
-0.51
17
17
GLU
-0.49
18
18
ARG
-0.50
19
19
ALA
-0.44
20
20
THR
-0.38
21
21
LEU
-0.32
22
22
SER
-0.28
23
23
CYS
-0.26
24
24
ARG
-0.24
25
25
ALA
-0.21
26
26
SER
-0.22
27
27
GLN
-0.22
28
28
SER
-0.19
29
29
VAL
-0.15
30
30
SER
-0.04
31
31
SER
-0.01
32
32
ASP
0.00
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.87 .. 0.26
-0.87
0.26
#
Residue identifier
Residue name
DAQscore[Total]
1
1
GLU
-0.17
2
2
ILE
-0.30
3
3
VAL
-0.28
4
4
MET
-0.29
5
5
THR
-0.26
6
6
GLN
-0.22
7
7
SER
-0.26
8
8
PRO
-0.21
9
9
ALA
-0.26
10
10
THR
-0.30
11
11
LEU
-0.48
12
12
SER
-0.51
13
13
VAL
-0.44
14
14
SER
-0.46
15
15
PRO
-0.46
16
16
GLY
-0.47
17
17
GLU
-0.44
18
18
ARG
-0.42
19
19
ALA
-0.34
20
20
THR
-0.23
21
21
LEU
-0.19
22
22
SER
-0.21
23
23
CYS
-0.18
24
24
ARG
-0.14
25
25
ALA
-0.13
26
26
SER
-0.10
27
27
GLN
-0.11
28
28
SER
-0.05
29
29
VAL
-0.03
30
30
SER
0.14
31
31
SER
0.16
32
32
ASP
0.11