34403 8GZU 49 v1-0
34403_8gzu_49_v1-0
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RCSB PDB: 8GZU
EMDB: 34403
Structure title Cryo-EM structure of Tetrahymena thermophila respiratory Megacomplex MC (IV2+I+III2+II)2
Method ELECTRON MICROSCOPY
Resolution 4.18 Å
Source organism Tetrahymena thermophila SB210
3D View
Download PDB file DAQ[AA]
Render Map
Sequence of
103  ​I​​N​​F​​K​​T​​K​​Y​​R​​F​​Y​113  ​K​​F​​I​​S​​T​​N​​F​​N​​L​​Q​123  ​T​​I​​I​​K​​N​​C​​N​​D​​K​​I​133  ​I​​F​​S​​T​​L​​L​​Y​​I​​V​​N​143  ​L​​N​​Y​​S​​F​​F​​Y​​K​​T​​I​153  ​K​​N​​T​​D​​L​​I​​V​​Y​​L​​L​163  ​A​​N​​K​​F​​S​​I​​L​​N​​D​​N​173  ​I​​I​​V​​S​​K​​F​​N​​I​​S​​K​183  ​F​​N​​D​​Y​​I​​K​​Y​​I​​N​​N​193  ​T​​N​​S​​I​​D​​T​​Y​​L​​E​​N​203  ​Q​​I​​I​​L​​G​​L​​N​​K​​N​​I​221  ​N​​T​​K​​L​​L​​N​​S​​Y​​S​​N​231  ​L​​K​​N​​L​​V​​N​​I​​T​​N​​N​241  ​T​​F​​Y​​L​​K​​K​​I​​N​​D​​N​251  ​Y​​N​​T​​V​​I​​N​​S​​E​​F​​L​261  ​T​​Y​​L​​K​​S​​N​​Y​​K​​I​​S​271  ​F​​S​​A​​S​​N​​I​​V​​K​​Y​​L​281  ​S​​D​​K​​S​​V​​N​​N​​S​​V​​I​291  ​L​​Y​​L​​R​​K​​N​​K​​I​​F​​N​301  ​K​​S​​R​​Y​​S​​R​​N​​R​​Q​​T​311  ​Y​​R​​T​​G​​A​​Y​​W​​C​​L​​Y​321  ​V​​N​​I​​I​​A​​V​​V​​A​​F​​Y​331  ​F​​W​​F​​Y​​K​​F​​T​​M​​N​​F​341  ​G​​Y​​L​​W​​W​​L​​L​​Y​​S​​L​351  ​I​​L​​S​​F​​F​​F​​S​​R​​A​​L​361  ​K​​H​​R​​F​​Y​​N​​P​​L​​N​​V​371  ​M​​T​​E​​F​​K​​N​​G​​F​​M​​W​381  ​F​​I​​I​​I​​L​​I​​N​​I​​F​​K​391  ​P​​L​​L​​K​​L​​L​​E​​N​​N​​Y​401  ​I​​N​​L​​Y​​N​​H​​L​​V​​I​​K​411  ​Y​​Y​​Q​​S​​F​​I​​C​​N​​T​​L​421  ​I​​N​​K​​K​​K​​L​​E​​F​​N​​Y​431  ​I​​L​​S​​S​​F​​K​​F​​I​​K​​E​441  ​L​​N​​N​​I​​I​​I​​I​​S​​L​​N​451  ​K​​L​​F​
colorbar

DAQ Score Table

Score range in the table: -0.25 .. 0.21
-0.25
0.21
#
Residue identifier
Residue name
DAQscore[AA]
1
103
ILE
0.12
2
104
ASN
0.14
3
105
PHE
0.12
4
106
LYS
0.17
5
107
THR
0.16
6
108
LYS
0.16
7
109
TYR
0.15
8
110
ARG
0.17
9
111
PHE
0.15
10
112
TYR
0.12
11
113
LYS
0.15
12
114
PHE
0.11
13
115
ILE
0.13
14
116
SER
0.09
15
117
THR
0.09
16
118
ASN
0.12
17
119
PHE
0.12
18
120
ASN
0.11
19
121
LEU
0.12
20
122
GLN
0.12
21
123
THR
0.08
22
124
ILE
0.06
23
125
ILE
0.04
24
126
LYS
0.04
25
127
ASN
0.04
26
128
CYS
0.01
27
129
ASN
-0.03
28
130
ASP
-0.05
29
131
LYS
0.00
30
132
ILE
0.03
31
133
ILE
0.00
32
134
PHE
0.00
3D View
Download PDB file DAQ[Cα]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -1.10 .. 0.24
-1.10
0.24
#
Residue identifier
Residue name
DAQscore[ATOM]
1
103
ILE
0.11
2
104
ASN
0.11
3
105
PHE
0.12
4
106
LYS
0.10
5
107
THR
0.13
6
108
LYS
0.15
7
109
TYR
0.15
8
110
ARG
-0.09
9
111
PHE
-0.07
10
112
TYR
-0.05
11
113
LYS
-0.05
12
114
PHE
-0.06
13
115
ILE
-0.08
14
116
SER
-0.13
15
117
THR
-0.13
16
118
ASN
-0.14
17
119
PHE
-0.15
18
120
ASN
-0.15
19
121
LEU
-0.17
20
122
GLN
-0.19
21
123
THR
-0.19
22
124
ILE
-0.20
23
125
ILE
-0.24
24
126
LYS
-0.26
25
127
ASN
-0.28
26
128
CYS
-0.30
27
129
ASN
-0.15
28
130
ASP
-0.17
29
131
LYS
-0.30
30
132
ILE
-0.30
31
133
ILE
-0.28
32
134
PHE
-0.23
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.28 .. 0.42
-0.28
0.42
#
Residue identifier
Residue name
DAQscore[SS]
1
103
ILE
-0.07
2
104
ASN
-0.05
3
105
PHE
-0.04
4
106
LYS
-0.06
5
107
THR
-0.03
6
108
LYS
-0.02
7
109
TYR
-0.02
8
110
ARG
-0.04
9
111
PHE
-0.03
10
112
TYR
-0.05
11
113
LYS
-0.09
12
114
PHE
-0.12
13
115
ILE
-0.11
14
116
SER
-0.10
15
117
THR
-0.09
16
118
ASN
-0.07
17
119
PHE
-0.08
18
120
ASN
-0.08
19
121
LEU
-0.09
20
122
GLN
-0.08
21
123
THR
-0.09
22
124
ILE
-0.11
23
125
ILE
-0.09
24
126
LYS
-0.12
25
127
ASN
-0.17
26
128
CYS
-0.21
27
129
ASN
-0.18
28
130
ASP
-0.16
29
131
LYS
-0.13
30
132
ILE
-0.09
31
133
ILE
-0.07
32
134
PHE
-0.06
3D View
Download PDB file DAQ[Total]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.99 .. 0.52
-0.99
0.52
#
Residue identifier
Residue name
DAQscore[Total]
1
103
ILE
0.16
2
104
ASN
0.20
3
105
PHE
0.21
4
106
LYS
0.21
5
107
THR
0.26
6
108
LYS
0.28
7
109
TYR
0.28
8
110
ARG
0.04
9
111
PHE
0.05
10
112
TYR
0.03
11
113
LYS
0.00
12
114
PHE
-0.08
13
115
ILE
-0.07
14
116
SER
-0.14
15
117
THR
-0.12
16
118
ASN
-0.09
17
119
PHE
-0.11
18
120
ASN
-0.11
19
121
LEU
-0.15
20
122
GLN
-0.16
21
123
THR
-0.21
22
124
ILE
-0.25
23
125
ILE
-0.28
24
126
LYS
-0.34
25
127
ASN
-0.42
26
128
CYS
-0.50
27
129
ASN
-0.36
28
130
ASP
-0.38
29
131
LYS
-0.43
30
132
ILE
-0.37
31
133
ILE
-0.35
32
134
PHE
-0.29