35766 8IWH V v1-1
35766_8iwh_V_v1-1
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RCSB PDB: 8IWH
EMDB: 35766
Structure title Structure and characteristics of a photosystem II supercomplex containing monomeric LHCX and dimeric FCPII antennae from the diatom Thalassiosira pseudonana
Method ELECTRON MICROSCOPY
Resolution 2.68 Å
Source organism Thalassiosira pseudonana
3D View
Download PDB file DAQ[AA]
Render Map
Converting to mmCIF
SequenceNo structure available
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DAQ Score Table

Score range in the table: 0.66 .. 1.50
0.66
1.50
#
Residue identifier
Residue name
DAQscore[AA]
1
28
ASP
0.96
2
29
LEU
0.94
3
30
ASP
0.97
4
31
GLU
0.98
5
32
ALA
0.96
6
33
THR
1.02
7
34
ARG
0.99
8
35
THR
0.98
9
36
VAL
0.96
10
37
VAL
0.94
11
38
THR
1.01
12
39
ASP
0.96
13
40
SER
0.98
14
41
SER
1.02
15
42
GLY
0.98
16
43
ASN
1.06
17
44
THR
1.16
18
45
THR
1.24
19
46
VAL
1.25
20
47
LEU
1.29
21
48
THR
1.35
22
49
PRO
1.38
23
50
GLU
1.44
24
51
GLN
1.44
25
52
VAL
1.43
26
53
LYS
1.40
27
54
ARG
1.45
28
55
GLY
1.50
29
56
LYS
1.48
30
57
ARG
1.39
31
58
LEU
1.41
32
59
PHE
1.40
3D View
Download PDB file DAQ[Cα]
Render Map
Sequence of
28   ​D​​L​​D​​E​​A​​T​​R​​T​​V​​V​38   ​T​​D​​S​​S​​G​​N​​T​​T​​V​​L​48   ​T​​P​​E​​Q​​V​​K​​R​​G​​K​​R​58   ​L​​F​​N​​A​​T​​C​​G​​A​​C​​H​68   ​T​​G​​G​​I​​T​​K​​T​​N​​P​​N​78   ​V​​G​​L​​D​​P​​E​​A​​L​​S​​L​88   ​A​​T​​P​​R​​R​​D​​N​​I​​S​​A​98   ​L​​V​​D​​Y​​L​​K​​N​​P​​T​​T​108  ​Y​​D​​G​​L​​E​​S​​I​​A​​E​​I​118  ​H​​P​​S​​I​​K​​S​​A​​D​​I​​Y​128  ​P​​R​​M​​R​​S​​L​​T​​D​​E​​D​138  ​L​​Y​​S​​I​​A​​G​​H​​I​​M​​L​148  ​Q​​P​​K​​I​​V​​A​​E​​K​​W​​G​158  ​G​​G​​K​​I​​Y​
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DAQ Score Table

Score range in the table: 0.40 .. 1.18
0.40
1.18
#
Residue identifier
Residue name
DAQscore[ATOM]
1
28
ASP
0.84
2
29
LEU
0.91
3
30
ASP
0.95
4
31
GLU
0.98
5
32
ALA
1.00
6
33
THR
1.02
7
34
ARG
0.88
8
35
THR
0.91
9
36
VAL
0.88
10
37
VAL
0.91
11
38
THR
0.98
12
39
ASP
0.88
13
40
SER
0.87
14
41
SER
0.90
15
42
GLY
0.92
16
43
ASN
1.03
17
44
THR
1.04
18
45
THR
1.02
19
46
VAL
0.96
20
47
LEU
0.97
21
48
THR
0.97
22
49
PRO
0.98
23
50
GLU
1.00
24
51
GLN
0.99
25
52
VAL
0.99
26
53
LYS
1.07
27
54
ARG
1.05
28
55
GLY
1.08
29
56
LYS
0.81
30
57
ARG
0.78
31
58
LEU
0.91
32
59
PHE
0.95
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.56 .. 0.81
-0.56
0.81
#
Residue identifier
Residue name
DAQscore[SS]
1
28
ASP
0.22
2
29
LEU
0.29
3
30
ASP
0.28
4
31
GLU
0.31
5
32
ALA
0.34
6
33
THR
0.36
7
34
ARG
0.30
8
35
THR
0.35
9
36
VAL
0.40
10
37
VAL
0.43
11
38
THR
0.46
12
39
ASP
0.47
13
40
SER
0.48
14
41
SER
0.55
15
42
GLY
0.62
16
43
ASN
0.68
17
44
THR
0.72
18
45
THR
0.74
19
46
VAL
0.73
20
47
LEU
0.72
21
48
THR
0.73
22
49
PRO
0.76
23
50
GLU
0.78
24
51
GLN
0.79
25
52
VAL
0.77
26
53
LYS
0.81
27
54
ARG
0.70
28
55
GLY
0.58
29
56
LYS
0.55
30
57
ARG
0.48
31
58
LEU
0.43
32
59
PHE
0.41
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table