35823 8IYJ YB v1-1
35823_8iyj_YB_v1-1
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RCSB PDB: 8IYJ
EMDB: 35823
Structure title Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
Method ELECTRON MICROSCOPY
Resolution 3.5 Å
Source organism Mus musculus
3D View
Download PDB file DAQ[AA]
Render Map
SequenceNo structure available
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DAQ Score Table

Score range in the table: -0.11 .. 0.80
-0.11
0.80
#
Residue identifier
Residue name
DAQscore[AA]
1
21
LEU
0.15
2
22
VAL
0.09
3
23
SER
0.18
4
24
GLU
0.18
5
25
GLY
0.22
6
26
PHE
0.23
7
27
THR
0.21
8
28
VAL
0.27
9
29
LYS
0.12
10
30
ALA
0.15
11
31
MET
0.22
12
32
MET
0.31
13
33
LYS
0.23
14
34
ASN
0.18
15
35
SER
0.09
16
36
VAL
0.14
17
37
VAL
0.10
18
38
ARG
0.11
19
39
GLY
0.17
20
40
PRO
0.12
21
41
PRO
0.19
22
42
VAL
0.12
23
43
ALA
0.10
24
44
GLY
0.11
25
45
ALA
0.11
26
46
PHE
0.14
27
47
LYS
0.14
28
48
GLU
0.28
29
49
ARG
0.27
30
50
PRO
0.26
31
51
ALA
0.19
32
52
LYS
0.25
3D View
Download PDB file DAQ[Cα]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.23 .. 0.89
-0.23
0.89
#
Residue identifier
Residue name
DAQscore[ATOM]
1
21
LEU
-0.23
2
22
VAL
-0.15
3
23
SER
-0.08
4
24
GLU
-0.06
5
25
GLY
-0.02
6
26
PHE
0.02
7
27
THR
0.08
8
28
VAL
0.12
9
29
LYS
0.14
10
30
ALA
0.16
11
31
MET
0.08
12
32
MET
0.14
13
33
LYS
0.15
14
34
ASN
0.14
15
35
SER
0.18
16
36
VAL
0.19
17
37
VAL
0.31
18
38
ARG
0.39
19
39
GLY
0.43
20
40
PRO
0.47
21
41
PRO
0.46
22
42
VAL
0.46
23
43
ALA
0.43
24
44
GLY
0.43
25
45
ALA
0.43
26
46
PHE
0.39
27
47
LYS
0.29
28
48
GLU
0.28
29
49
ARG
0.25
30
50
PRO
0.41
31
51
ALA
0.39
32
52
LYS
0.37
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.65 .. 0.59
-0.65
0.59
#
Residue identifier
Residue name
DAQscore[SS]
1
21
LEU
0.39
2
22
VAL
0.34
3
23
SER
0.30
4
24
GLU
0.30
5
25
GLY
0.31
6
26
PHE
0.33
7
27
THR
0.36
8
28
VAL
0.40
9
29
LYS
0.36
10
30
ALA
0.37
11
31
MET
0.36
12
32
MET
0.31
13
33
LYS
0.30
14
34
ASN
0.29
15
35
SER
0.28
16
36
VAL
0.28
17
37
VAL
0.29
18
38
ARG
0.31
19
39
GLY
0.29
20
40
PRO
0.32
21
41
PRO
0.35
22
42
VAL
0.39
23
43
ALA
0.32
24
44
GLY
0.30
25
45
ALA
0.29
26
46
PHE
0.26
27
47
LYS
0.22
28
48
GLU
0.26
29
49
ARG
0.27
30
50
PRO
0.26
31
51
ALA
0.25
32
52
LYS
0.21
3D View
Download PDB file DAQ[Total]
Render Map
Processing file... [143863/143863]
SequenceNo structure available
colorbar

DAQ Score Table