37421 8WBD B v1-0
37421_8wbd_B_v1-0
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RCSB PDB: 8WBD
EMDB: 37421
Structure title CryoEM structure of non-structural protein 1 hexamer 1 from dengue virus type 4
Method ELECTRON MICROSCOPY
Resolution 2.9 Γ…
Source organism Dengue virus 4 Philippines/H241/1956
3D View
Download PDB file DAQ[AA]
Render Map
Converting to mmCIF
SequenceNo structure available
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DAQ Score Table

Score range in the table: 0.07 .. 0.88
0.07
0.88
#
Residue identifier
Residue name
DAQscore[AA]
1
1
ASP
0.55
2
2
THR
0.45
3
3
GLY
0.41
4
4
CYS
0.46
5
5
ALA
0.44
6
6
VAL
0.40
7
7
SER
0.50
8
8
TRP
0.54
9
9
SER
0.62
10
10
GLY
0.64
11
11
LYS
0.60
12
12
GLU
0.66
13
13
LEU
0.60
14
14
LYS
0.61
15
15
CYS
0.57
16
16
GLY
0.48
17
17
SER
0.50
18
18
GLY
0.59
19
19
ILE
0.45
20
20
PHE
0.43
21
21
VAL
0.51
22
22
ILE
0.52
23
23
ASP
0.50
24
24
ASN
0.47
25
25
VAL
0.50
26
26
HIS
0.43
27
27
THR
0.43
28
28
TRP
0.25
29
29
THR
0.20
30
30
GLU
0.32
31
31
GLN
0.31
32
32
TYR
0.28
3D View
Download PDB file DAQ[CΞ±]
Render Map
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.10 .. 0.77
0.10
0.77
#
Residue identifier
Residue name
DAQscore[ATOM]
1
1
ASP
0.48
2
2
THR
0.48
3
3
GLY
0.48
4
4
CYS
0.41
5
5
ALA
0.47
6
6
VAL
0.50
7
7
SER
0.53
8
8
TRP
0.55
9
9
SER
0.58
10
10
GLY
0.48
11
11
LYS
0.66
12
12
GLU
0.68
13
13
LEU
0.70
14
14
LYS
0.64
15
15
CYS
0.60
16
16
GLY
0.59
17
17
SER
0.55
18
18
GLY
0.44
19
19
ILE
0.51
20
20
PHE
0.47
21
21
VAL
0.50
22
22
ILE
0.49
23
23
ASP
0.55
24
24
ASN
0.51
25
25
VAL
0.48
26
26
HIS
0.43
27
27
THR
0.40
28
28
TRP
0.19
29
29
THR
0.29
30
30
GLU
0.23
31
31
GLN
0.19
32
32
TYR
0.19
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
Sequence of
1    β€‹D​​T​​G​​C​​A​​V​​S​​W​​S​​G​11   β€‹K​​E​​L​​K​​C​​G​​S​​G​​I​​F​21   β€‹V​​I​​D​​N​​V​​H​​T​​W​​T​​E​31   β€‹Q​​Y​​K​​F​​Q​​P​​E​​S​​P​​A​41   β€‹R​​L​​A​​S​​A​​I​​L​​N​​A​​H​51   β€‹E​​D​​G​​V​​C​​G​​I​​R​​S​​T​61   β€‹T​​R​​L​​E​​N​​I​​M​​W​​K​​Q​71   β€‹I​​T​​N​​E​​L​​N​​Y​​V​​L​​W​81   β€‹E​​G​​G​​H​​D​​L​​T​​V​​V​​A​91   β€‹G​​D​​V​​K​​G​​V​​L​​S​​K​​G​101  β€‹K​​R​​A​​L​​A​​P​​P​​V​​S​​T​133  β€‹F​​L​​I​​D​​G​​P​​D​​T​​S​​E​143  β€‹C​​P​​N​​E​​R​​R​​A​​W​​N​​F​153  β€‹L​​E​​V​​E​​D​​Y​​G​​F​​G​​M​163  β€‹F​​T​​T​​N​​I​​W​​M​​K​​F​​R​173  β€‹E​​G​​S​​S​​E​​V​​C​​D​​H​​R​183  β€‹L​​M​​S​​A​​A​​I​​K​​D​​Q​​K​193  β€‹A​​V​​H​​A​​D​​M​​G​​Y​​W​​I​203  β€‹E​​S​​S​​K​​N​​Q​​T​​W​​Q​​I​213  β€‹E​​K​​A​​S​​L​​I​​E​​V​​K​​T​223  β€‹C​​L​​W​​P​​K​​T​​H​​T​​L​​W​233  β€‹S​​N​​G​​V​​L​​E​​S​​Q​​M​​L​243  β€‹I​​P​​K​​A​​Y​​A​​G​​P​​F​​S​253  β€‹Q​​H​​N​​Y​​R​​Q​​G​​Y​​A​​T​263  β€‹Q​​T​​V​​G​​P​​W​​H​​L​​G​​K​273  β€‹L​​E​​I​​D​​F​​G​​E​​C​​P​​G​283  β€‹T​​T​​V​​T​​I​​Q​​E​​D​​C​​D​293  β€‹H​​R​​G​​P​​S​​L​​R​​T​​T​​T​303  β€‹A​​S​​G​​K​​L​​V​​T​​Q​​W​​C​313  β€‹C​​R​​S​​C​​T​​M​​P​​P​​L​​R​323  β€‹F​​L​​G​​E​​D​​G​​C​​W​​Y​​G​333  β€‹M​​E​​I​​R​​P​​L​​S​​E​​K​​E​343  β€‹E​​N​​M​​V​​K​​S​​Q​​V​​S​​A​
colorbar

DAQ Score Table

Score range in the table: -0.34 .. 1.05
-0.34
1.05
#
Residue identifier
Residue name
DAQscore[SS]
1
1
ASP
0.44
2
2
THR
0.42
3
3
GLY
0.39
4
4
CYS
0.44
5
5
ALA
0.43
6
6
VAL
0.33
7
7
SER
0.31
8
8
TRP
0.30
9
9
SER
0.29
10
10
GLY
0.32
11
11
LYS
0.37
12
12
GLU
0.39
13
13
LEU
0.40
14
14
LYS
0.35
15
15
CYS
0.28
16
16
GLY
0.20
17
17
SER
0.18
18
18
GLY
0.14
19
19
ILE
0.10
20
20
PHE
0.03
21
21
VAL
-0.02
22
22
ILE
-0.11
23
23
ASP
-0.18
24
24
ASN
-0.20
25
25
VAL
-0.13
26
26
HIS
-0.14
27
27
THR
-0.14
28
28
TRP
-0.16
29
29
THR
-0.19
30
30
GLU
-0.21
31
31
GLN
-0.18
32
32
TYR
-0.12
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.24 .. 2.17
0.24
2.17
#
Residue identifier
Residue name
DAQscore[Total]
1
1
ASP
1.47
2
2
THR
1.35
3
3
GLY
1.28
4
4
CYS
1.31
5
5
ALA
1.34
6
6
VAL
1.23
7
7
SER
1.34
8
8
TRP
1.39
9
9
SER
1.49
10
10
GLY
1.44
11
11
LYS
1.62
12
12
GLU
1.73
13
13
LEU
1.69
14
14
LYS
1.61
15
15
CYS
1.45
16
16
GLY
1.26
17
17
SER
1.23
18
18
GLY
1.17
19
19
ILE
1.06
20
20
PHE
0.93
21
21
VAL
0.99
22
22
ILE
0.91
23
23
ASP
0.87
24
24
ASN
0.78
25
25
VAL
0.85
26
26
HIS
0.72
27
27
THR
0.69
28
28
TRP
0.27
29
29
THR
0.30
30
30
GLU
0.33
31
31
GLN
0.33
32
32
TYR
0.35