37424 8WBG A v1-0
37424_8wbg_A_v1-0
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RCSB PDB: 8WBG
EMDB: 37424
Structure title CryoEM structure of non-structural protein 1 tetramer from ZIKA virus
Method ELECTRON MICROSCOPY
Resolution 3.2 Å
Source organism dengue virus type 4
3D View
Download PDB file DAQ[AA]
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Sequence of
1    ​H​​V​​G​​C​​S​​V​​D​​F​​S​​K​11   ​K​​E​​T​​R​​C​​G​​T​​G​​V​​F​21   ​V​​Y​​N​​D​​V​​E​​A​​W​​R​​D​31   ​R​​Y​​K​​Y​​H​​P​​D​​S​​P​​R​41   ​R​​L​​A​​A​​A​​V​​K​​Q​​A​​W​51   ​E​​D​​G​​I​​C​​G​​I​​S​​S​​V​61   ​S​​R​​M​​E​​N​​I​​M​​W​​R​​S​71   ​V​​E​​G​​E​​L​​N​​A​​I​​L​​E​81   ​E​​N​​G​​V​​Q​​L​​T​​V​​V​​V​91   ​G​​S​​V​​K​​N​​P​​M​​W​​R​​G​101  ​P​​Q​​R​​L​​P​​V​​P​​V​​N​​E​111  ​L​​P​​H​​G​​W​​K​​A​​W​​G​​K​121  ​S​​Y​​F​​V​​R​​A​​A​​K​​T​​N​131  ​N​​S​​F​​V​​V​​D​​G​​D​​T​​L​141  ​K​​E​​C​​P​​L​​K​​H​​R​​A​​W​151  ​N​​S​​F​​L​​V​​E​​D​​H​​G​​F​161  ​G​​V​​F​​H​​T​​S​​V​​W​​L​​K​171  ​V​​R​​E​​D​​Y​​S​​L​​E​​C​​D​181  ​P​​A​​V​​I​​G​​T​​A​​V​​K​​G​191  ​K​​E​​A​​V​​H​​S​​D​​L​​G​​Y​201  ​W​​I​​E​​S​​E​​K​​N​​D​​T​​W​211  ​R​​L​​K​​R​​A​​H​​L​​I​​E​​M​221  ​K​​T​​C​​E​​W​​P​​K​​S​​H​​T​231  ​L​​W​​T​​D​​G​​I​​E​​E​​S​​D​241  ​L​​I​​I​​P​​K​​S​​L​​A​​G​​P​251  ​L​​S​​H​​H​​N​​T​​R​​E​​G​​Y​261  ​R​​T​​Q​​M​​K​​G​​P​​W​​H​​S​271  ​E​​E​​L​​E​​I​​R​​F​​E​​E​​C​281  ​P​​G​​T​​K​​V​​H​​V​​E​​E​​T​291  ​C​​G​​T​​R​​G​​P​​S​​L​​R​​S​301  ​T​​T​​A​​S​​G​​R​​V​​I​​E​​E​311  ​W​​C​​C​​R​​E​​C​​T​​M​​P​​P​321  ​L​​S​​F​​R​​A​​K​​D​​G​​C​​W​331  ​Y​​G​​M​​E​​I​​R​​P​​R​​K​​E​341  ​P​​E​​S​​N​​L​​V​​R​​S​​M​​V​351  ​T​​A​
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DAQ Score Table

Score range in the table: -0.25 .. 0.93
-0.25
0.93
#
Residue identifier
Residue name
DAQscore[AA]
1
1
HIS
0.12
2
2
VAL
0.06
3
3
GLY
0.00
4
4
CYS
0.03
5
5
SER
-0.21
6
6
VAL
-0.25
7
7
ASP
-0.08
8
8
PHE
-0.05
9
9
SER
0.04
10
10
LYS
0.10
11
11
LYS
0.15
12
12
GLU
0.36
13
13
THR
0.37
14
14
ARG
0.43
15
15
CYS
0.56
16
16
GLY
0.54
17
17
THR
0.57
18
18
GLY
0.41
19
19
VAL
0.37
20
20
PHE
0.32
21
21
VAL
0.38
22
22
TYR
0.45
23
23
ASN
0.49
24
24
ASP
0.70
25
25
VAL
0.64
26
26
GLU
0.58
27
27
ALA
0.40
28
28
TRP
0.34
29
29
ARG
0.29
30
30
ASP
0.18
31
31
ARG
0.08
32
32
TYR
-0.01
3D View
Download PDB file DAQ[Cα]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.24 .. 0.92
-0.24
0.92
#
Residue identifier
Residue name
DAQscore[ATOM]
1
1
HIS
0.34
2
2
VAL
0.27
3
3
GLY
0.35
4
4
CYS
0.29
5
5
SER
0.39
6
6
VAL
0.47
7
7
ASP
0.51
8
8
PHE
0.58
9
9
SER
0.51
10
10
LYS
0.49
11
11
LYS
0.55
12
12
GLU
0.51
13
13
THR
0.50
14
14
ARG
0.56
15
15
CYS
0.62
16
16
GLY
0.63
17
17
THR
0.62
18
18
GLY
0.48
19
19
VAL
0.42
20
20
PHE
0.47
21
21
VAL
0.47
22
22
TYR
0.45
23
23
ASN
0.52
24
24
ASP
0.49
25
25
VAL
0.45
26
26
GLU
0.46
27
27
ALA
0.46
28
28
TRP
0.50
29
29
ARG
0.46
30
30
ASP
0.39
31
31
ARG
0.37
32
32
TYR
0.46
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
Render Map
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.60 .. 1.44
-0.60
1.44
#
Residue identifier
Residue name
DAQscore[SS]
1
1
HIS
-0.22
2
2
VAL
-0.21
3
3
GLY
-0.21
4
4
CYS
-0.17
5
5
SER
-0.12
6
6
VAL
-0.10
7
7
ASP
-0.09
8
8
PHE
-0.12
9
9
SER
-0.12
10
10
LYS
-0.09
11
11
LYS
-0.05
12
12
GLU
0.06
13
13
THR
0.11
14
14
ARG
0.09
15
15
CYS
0.08
16
16
GLY
-0.03
17
17
THR
-0.02
18
18
GLY
0.01
19
19
VAL
-0.05
20
20
PHE
-0.05
21
21
VAL
-0.05
22
22
TYR
-0.08
23
23
ASN
-0.12
24
24
ASP
-0.13
25
25
VAL
-0.15
26
26
GLU
-0.15
27
27
ALA
-0.20
28
28
TRP
-0.19
29
29
ARG
-0.21
30
30
ASP
-0.33
31
31
ARG
-0.37
32
32
TYR
-0.39
3D View
Download PDB file DAQ[Total]
Render Map
SequenceNo structure available
colorbar

DAQ Score Table