40607 8SMZ E v1-2
40607_8smz_E_v1-2
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RCSB PDB: 8SMZ
EMDB: 40607
Structure title Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (Class 4)
Method ELECTRON MICROSCOPY
Resolution 3.2 Å
Source organism Homo sapiens
3D View
Download PDB file DAQ[AA]
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DAQ Score Table

Score range in the table: 0.30 .. 1.26
0.30
1.26
#
Residue identifier
Residue name
DAQscore[AA]
1
37
LYS
0.56
2
38
PRO
0.63
3
39
HIS
0.49
4
40
ARG
0.49
5
41
TYR
0.54
6
42
ARG
0.57
7
43
PRO
0.48
8
44
GLY
0.53
9
45
THR
0.57
10
46
VAL
0.51
11
47
ALA
0.59
12
48
LEU
0.51
13
49
ARG
0.68
14
50
GLU
0.76
15
51
ILE
0.77
16
52
ARG
0.76
17
53
ARG
0.70
18
54
TYR
0.61
19
55
GLN
0.60
20
56
LYS
0.57
21
57
SER
0.54
22
58
THR
0.59
23
59
GLU
0.63
24
60
LEU
0.58
25
61
LEU
0.62
26
62
ILE
0.75
27
63
ARG
0.61
28
64
LYS
0.57
29
65
LEU
0.67
30
66
PRO
0.67
31
67
PHE
0.68
32
68
GLN
0.71
3D View
Download PDB file DAQ[Cα]
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DAQ Score Table

Score range in the table: -0.20 .. 0.94
-0.20
0.94
#
Residue identifier
Residue name
DAQscore[ATOM]
1
37
LYS
0.94
2
38
PRO
0.91
3
39
HIS
0.72
4
40
ARG
0.76
5
41
TYR
0.73
6
42
ARG
0.78
7
43
PRO
0.79
8
44
GLY
0.84
9
45
THR
0.83
10
46
VAL
0.80
11
47
ALA
0.82
12
48
LEU
0.72
13
49
ARG
0.75
14
50
GLU
0.74
15
51
ILE
0.78
16
52
ARG
0.78
17
53
ARG
0.81
18
54
TYR
0.77
19
55
GLN
0.68
20
56
LYS
0.70
21
57
SER
0.67
22
58
THR
0.80
23
59
GLU
0.79
24
60
LEU
0.76
25
61
LEU
0.73
26
62
ILE
0.76
27
63
ARG
0.76
28
64
LYS
0.78
29
65
LEU
0.86
30
66
PRO
0.85
31
67
PHE
0.86
32
68
GLN
0.85
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
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DAQ Score Table

3D View
Download PDB file DAQ[Total]
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DAQ Score Table