4370 6GB2 BS v1-3
Structure title Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.
Method ELECTRON MICROSCOPY
Resolution 3.2 Å
Source organism Sus scrofa

Sequence of
38   ​P​​V​​E​​N​​E​​A​​V​​A​​P​​E​48   ​F​​T​​N​​R​​N​​P​​R​​N​​L​​E​58   ​L​​L​​A​​V​​A​​R​​K​​E​​R​​G​68   ​W​​G​​T​​V​​W​​P​​S​​R​​E​​F​78   ​W​​H​​R​​L​​R​​V​​I​​R​​T​​Q​88   ​H​​H​​I​​E​​A​​L​​V​​E​​H​​R​98   ​N​​G​​Q​​V​​V​​V​​S​​A​​S​​T​108  ​R​​E​​W​​A​​I​​K​​K​​H​​L​​Y​118  ​S​​T​​R​​N​​V​​V​​A​​C​​E​​S​128  ​V​​G​​R​​V​​L​​A​​E​​R​​C​​L​138  ​E​​A​​G​​I​​N​​F​​M​​V​​Y​​H​148  ​P​​T​​P​​W​​E​​A​​A​​S​​D​​S​158  ​I​​K​​R​​L​​Q​​H​​A​​M​​T​​E​168  ​G​​G​​V​​V​​L​​R​​E​​P​​R​​R​178  ​I​​Y​​E​
colorbar

DAQ Score Table

Score range in the table: 0.29 .. 1.29
0.29
1.29
#
Residue identifier
Residue name
DAQscore[AA]
1
38
PRO
0.34
2
39
VAL
0.42
3
40
GLU
0.46
4
41
ASN
0.39
5
42
GLU
0.29
6
43
ALA
0.31
7
44
VAL
0.44
8
45
ALA
0.40
9
46
PRO
0.39
10
47
GLU
0.40
11
48
PHE
0.43
12
49
THR
0.55
13
50
ASN
0.56
14
51
ARG
0.59
15
52
ASN
0.61
16
53
PRO
0.65
17
54
ARG
0.71
18
55
ASN
0.72
19
56
LEU
0.64
20
57
GLU
0.70
21
58
LEU
0.73
22
59
LEU
0.78
23
60
ALA
0.88
24
61
VAL
0.96
25
62
ALA
0.95
26
63
ARG
0.86
27
64
LYS
0.97
28
65
GLU
1.02
29
66
ARG
1.06
30
67
GLY
0.95
31
68
TRP
0.92
32
69
GLY
1.00
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.19 .. 0.99
0.19
0.99
#
Residue identifier
Residue name
DAQscore[ATOM]
1
38
PRO
0.49
2
39
VAL
0.49
3
40
GLU
0.43
4
41
ASN
0.39
5
42
GLU
0.47
6
43
ALA
0.54
7
44
VAL
0.52
8
45
ALA
0.59
9
46
PRO
0.55
10
47
GLU
0.58
11
48
PHE
0.65
12
49
THR
0.66
13
50
ASN
0.71
14
51
ARG
0.66
15
52
ASN
0.73
16
53
PRO
0.67
17
54
ARG
0.67
18
55
ASN
0.71
19
56
LEU
0.70
20
57
GLU
0.70
21
58
LEU
0.66
22
59
LEU
0.70
23
60
ALA
0.71
24
61
VAL
0.64
25
62
ALA
0.61
26
63
ARG
0.60
27
64
LYS
0.57
28
65
GLU
0.65
29
66
ARG
0.68
30
67
GLY
0.56
31
68
TRP
0.58
32
69
GLY
0.53
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: -0.54 .. 1.07
-0.54
1.07
#
Residue identifier
Residue name
DAQscore[SS]
1
38
PRO
-0.54
2
39
VAL
-0.51
3
40
GLU
-0.46
4
41
ASN
-0.41
5
42
GLU
-0.35
6
43
ALA
-0.29
7
44
VAL
-0.29
8
45
ALA
-0.27
9
46
PRO
-0.27
10
47
GLU
-0.24
11
48
PHE
-0.18
12
49
THR
-0.14
13
50
ASN
-0.13
14
51
ARG
-0.10
15
52
ASN
-0.13
16
53
PRO
-0.10
17
54
ARG
-0.06
18
55
ASN
-0.08
19
56
LEU
-0.07
20
57
GLU
-0.04
21
58
LEU
-0.02
22
59
LEU
-0.03
23
60
ALA
-0.04
24
61
VAL
-0.08
25
62
ALA
-0.10
26
63
ARG
-0.08
27
64
LYS
-0.06
28
65
GLU
-0.03
29
66
ARG
-0.07
30
67
GLY
-0.10
31
68
TRP
-0.14
32
69
GLY
-0.13
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.29 .. 2.94
0.29
2.94
#
Residue identifier
Residue name
DAQscore[Total]
1
38
PRO
0.29
2
39
VAL
0.40
3
40
GLU
0.43
4
41
ASN
0.37
5
42
GLU
0.42
6
43
ALA
0.55
7
44
VAL
0.67
8
45
ALA
0.73
9
46
PRO
0.66
10
47
GLU
0.74
11
48
PHE
0.89
12
49
THR
1.08
13
50
ASN
1.14
14
51
ARG
1.15
15
52
ASN
1.21
16
53
PRO
1.22
17
54
ARG
1.33
18
55
ASN
1.35
19
56
LEU
1.26
20
57
GLU
1.36
21
58
LEU
1.37
22
59
LEU
1.46
23
60
ALA
1.55
24
61
VAL
1.52
25
62
ALA
1.45
26
63
ARG
1.38
27
64
LYS
1.48
28
65
GLU
1.64
29
66
ARG
1.66
30
67
GLY
1.41
31
68
TRP
1.36
32
69
GLY
1.40