4370 6GB2 Bm v1-3
Structure title Unique features of mammalian mitochondrial translation initiation revealed by cryo-EM. This file contains the 39S ribosomal subunit.
Method ELECTRON MICROSCOPY
Resolution 3.2 Å
Source organism Sus scrofa

Sequence of
51   ​L​​V​​C​​P​​P​​I​​Q​​S​​R​​T​61   ​Y​​I​​P​​P​​E​​D​​L​​Q​​S​​R​71   ​L​​E​​S​​H​​V​​K​​E​​V​​F​​G​81   ​S​​S​​V​​P​​S​​N​​W​​Q​​D​​I​91   ​S​​L​​E​​D​​V​​H​​L​​K​​F​​S​101  ​F​​L​​A​​R​​L​​A​​N​​D​​L​​R​111  ​H​​A​​V​​P​​N​​S​​R​​L​​H​​Q​121  ​M​​C​​R​​V​​R​​D​​V​​L​​D​​F​131  ​Y​​N​​V​​P​​V​​Q​​D​​R​​S​​K​141  ​F​​D​​E​​L​​I​​A​​S​​N​​L​​P​151  ​H​​N​​L​​K​​I​​T​​W​​G​​Y​
colorbar

DAQ Score Table

Score range in the table: 0.03 .. 0.63
0.03
0.63
#
Residue identifier
Residue name
DAQscore[AA]
1
51
LEU
0.33
2
52
VAL
0.38
3
53
CYS
0.29
4
54
PRO
0.34
5
55
PRO
0.35
6
56
ILE
0.34
7
57
GLN
0.36
8
58
SER
0.40
9
59
ARG
0.40
10
60
THR
0.40
11
61
TYR
0.38
12
62
ILE
0.44
13
63
PRO
0.43
14
64
PRO
0.40
15
65
GLU
0.38
16
66
ASP
0.42
17
67
LEU
0.45
18
68
GLN
0.44
19
69
SER
0.43
20
70
ARG
0.35
21
71
LEU
0.28
22
72
GLU
0.30
23
73
SER
0.22
24
74
HIS
0.21
25
75
VAL
0.26
26
76
LYS
0.25
27
77
GLU
0.19
28
78
VAL
0.17
29
79
PHE
0.13
30
80
GLY
0.12
31
81
SER
0.10
32
82
SER
0.10
Sequence of
51   ​L​​V​​C​​P​​P​​I​​Q​​S​​R​​T​61   ​Y​​I​​P​​P​​E​​D​​L​​Q​​S​​R​71   ​L​​E​​S​​H​​V​​K​​E​​V​​F​​G​81   ​S​​S​​V​​P​​S​​N​​W​​Q​​D​​I​91   ​S​​L​​E​​D​​V​​H​​L​​K​​F​​S​101  ​F​​L​​A​​R​​L​​A​​N​​D​​L​​R​111  ​H​​A​​V​​P​​N​​S​​R​​L​​H​​Q​121  ​M​​C​​R​​V​​R​​D​​V​​L​​D​​F​131  ​Y​​N​​V​​P​​V​​Q​​D​​R​​S​​K​141  ​F​​D​​E​​L​​I​​A​​S​​N​​L​​P​151  ​H​​N​​L​​K​​I​​T​​W​​G​​Y​
colorbar

DAQ Score Table

Score range in the table: 0.03 .. 0.87
0.03
0.87
#
Residue identifier
Residue name
DAQscore[ATOM]
1
51
LEU
0.46
2
52
VAL
0.49
3
53
CYS
0.47
4
54
PRO
0.46
5
55
PRO
0.44
6
56
ILE
0.46
7
57
GLN
0.48
8
58
SER
0.48
9
59
ARG
0.50
10
60
THR
0.52
11
61
TYR
0.49
12
62
ILE
0.51
13
63
PRO
0.50
14
64
PRO
0.53
15
65
GLU
0.55
16
66
ASP
0.54
17
67
LEU
0.48
18
68
GLN
0.44
19
69
SER
0.40
20
70
ARG
0.38
21
71
LEU
0.25
22
72
GLU
0.20
23
73
SER
0.14
24
74
HIS
0.15
25
75
VAL
0.15
26
76
LYS
0.13
27
77
GLU
0.14
28
78
VAL
0.10
29
79
PHE
0.06
30
80
GLY
0.06
31
81
SER
0.03
32
82
SER
0.04
Sequence of
51   ​L​​V​​C​​P​​P​​I​​Q​​S​​R​​T​61   ​Y​​I​​P​​P​​E​​D​​L​​Q​​S​​R​71   ​L​​E​​S​​H​​V​​K​​E​​V​​F​​G​81   ​S​​S​​V​​P​​S​​N​​W​​Q​​D​​I​91   ​S​​L​​E​​D​​V​​H​​L​​K​​F​​S​101  ​F​​L​​A​​R​​L​​A​​N​​D​​L​​R​111  ​H​​A​​V​​P​​N​​S​​R​​L​​H​​Q​121  ​M​​C​​R​​V​​R​​D​​V​​L​​D​​F​131  ​Y​​N​​V​​P​​V​​Q​​D​​R​​S​​K​141  ​F​​D​​E​​L​​I​​A​​S​​N​​L​​P​151  ​H​​N​​L​​K​​I​​T​​W​​G​​Y​
colorbar

DAQ Score Table

Score range in the table: -0.10 .. 0.60
-0.10
0.60
#
Residue identifier
Residue name
DAQscore[SS]
1
51
LEU
0.27
2
52
VAL
0.23
3
53
CYS
0.24
4
54
PRO
0.24
5
55
PRO
0.24
6
56
ILE
0.22
7
57
GLN
0.22
8
58
SER
0.21
9
59
ARG
0.22
10
60
THR
0.26
11
61
TYR
0.31
12
62
ILE
0.34
13
63
PRO
0.35
14
64
PRO
0.37
15
65
GLU
0.40
16
66
ASP
0.43
17
67
LEU
0.47
18
68
GLN
0.46
19
69
SER
0.39
20
70
ARG
0.36
21
71
LEU
0.38
22
72
GLU
0.36
23
73
SER
0.34
24
74
HIS
0.34
25
75
VAL
0.37
26
76
LYS
0.34
27
77
GLU
0.33
28
78
VAL
0.28
29
79
PHE
0.24
30
80
GLY
0.22
31
81
SER
0.19
32
82
SER
0.18
Converting to mmCIF
SequenceNo structure available
colorbar

DAQ Score Table

Score range in the table: 0.18 .. 1.90
0.18
1.90
#
Residue identifier
Residue name
DAQscore[Total]
1
51
LEU
1.06
2
52
VAL
1.10
3
53
CYS
1.01
4
54
PRO
1.04
5
55
PRO
1.03
6
56
ILE
1.02
7
57
GLN
1.05
8
58
SER
1.09
9
59
ARG
1.12
10
60
THR
1.18
11
61
TYR
1.19
12
62
ILE
1.29
13
63
PRO
1.28
14
64
PRO
1.31
15
65
GLU
1.33
16
66
ASP
1.39
17
67
LEU
1.40
18
68
GLN
1.34
19
69
SER
1.21
20
70
ARG
1.09
21
71
LEU
0.91
22
72
GLU
0.86
23
73
SER
0.70
24
74
HIS
0.70
25
75
VAL
0.78
26
76
LYS
0.72
27
77
GLU
0.67
28
78
VAL
0.55
29
79
PHE
0.44
30
80
GLY
0.41
31
81
SER
0.33
32
82
SER
0.33