8469 5TV4 A v1-3
8469_5tv4_A_v1-3
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RCSB PDB: 5TV4
EMDB: 8469
Structure title 3D cryo-EM reconstruction of nucleotide-free MsbA in lipid nanodisc
Method ELECTRON MICROSCOPY
Resolution 4.2 Å
Source organism Escherichia coli O157:H7
3D View
Download PDB file DAQ[AA]
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DAQ Score Table

Score range in the table: -0.58 .. 0.74
-0.58
0.74
#
Residue identifier
Residue name
DAQscore[AA]
1
11
GLN
0.39
2
12
THR
0.35
3
13
PHE
0.26
4
14
ARG
0.18
5
15
ARG
0.12
6
16
LEU
0.07
7
17
TRP
-0.07
8
18
PRO
-0.14
9
19
THR
-0.13
10
20
ILE
-0.11
11
21
ALA
0.01
12
22
PRO
-0.01
13
23
PHE
-0.14
14
24
LYS
-0.06
15
25
ALA
-0.06
16
26
GLY
0.01
17
27
LEU
-0.03
18
28
ILE
-0.09
19
29
VAL
0.03
20
30
ALA
0.06
21
31
GLY
0.12
22
32
VAL
0.13
23
33
ALA
0.16
24
34
LEU
0.27
25
35
ILE
0.28
26
36
LEU
0.41
27
37
ASN
0.55
28
38
ALA
0.50
29
39
ALA
0.53
30
40
SER
0.40
31
41
ASP
0.36
32
42
THR
0.49
3D View
Download PDB file DAQ[Cα]
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DAQ Score Table

Score range in the table: -0.68 .. 0.84
-0.68
0.84
#
Residue identifier
Residue name
DAQscore[ATOM]
1
11
GLN
0.04
2
12
THR
0.01
3
13
PHE
0.01
4
14
ARG
0.06
5
15
ARG
0.04
6
16
LEU
0.13
7
17
TRP
-0.02
8
18
PRO
0.03
9
19
THR
-0.06
10
20
ILE
-0.01
11
21
ALA
0.02
12
22
PRO
0.06
13
23
PHE
0.06
14
24
LYS
0.13
15
25
ALA
0.21
16
26
GLY
0.16
17
27
LEU
0.22
18
28
ILE
0.14
19
29
VAL
0.26
20
30
ALA
0.32
21
31
GLY
0.39
22
32
VAL
0.32
23
33
ALA
0.35
24
34
LEU
0.40
25
35
ILE
0.32
26
36
LEU
0.44
27
37
ASN
0.47
28
38
ALA
0.55
29
39
ALA
0.51
30
40
SER
0.46
31
41
ASP
0.44
32
42
THR
0.40
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
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DAQ Score Table

Score range in the table: -1.16 .. 1.17
-1.16
1.17
#
Residue identifier
Residue name
DAQscore[SS]
1
11
GLN
-0.96
2
12
THR
-0.85
3
13
PHE
-0.76
4
14
ARG
-0.70
5
15
ARG
-0.67
6
16
LEU
-0.60
7
17
TRP
-0.54
8
18
PRO
-0.48
9
19
THR
-0.43
10
20
ILE
-0.39
11
21
ALA
-0.31
12
22
PRO
-0.20
13
23
PHE
0.02
14
24
LYS
0.14
15
25
ALA
0.22
16
26
GLY
0.27
17
27
LEU
0.28
18
28
ILE
0.29
19
29
VAL
0.30
20
30
ALA
0.28
21
31
GLY
0.25
22
32
VAL
0.20
23
33
ALA
0.18
24
34
LEU
0.18
25
35
ILE
0.17
26
36
LEU
0.17
27
37
ASN
0.16
28
38
ALA
0.15
29
39
ALA
0.13
30
40
SER
0.12
31
41
ASP
0.12
32
42
THR
0.11
3D View
Download PDB file DAQ[Total]
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DAQ Score Table