9777 6J40 37 v1-3
9777_6j40_37_v1-3
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RCSB PDB: 6J40
EMDB: 9777
Structure title Structure of C2S2M2-type PSII-FCPII supercomplex from diatom
Method ELECTRON MICROSCOPY
Resolution 3.8 Å
Source organism Chaetoceros neogracilis
3D View
Download PDB file DAQ[AA]
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DAQ Score Table

Score range in the table: -0.21 .. 0.47
-0.21
0.47
#
Residue identifier
Residue name
DAQscore[AA]
1
31
SER
0.15
2
32
GLU
0.12
3
33
ILE
0.21
4
34
GLU
0.18
5
35
LEU
0.18
6
36
GLY
0.19
7
37
VAL
0.18
8
38
THR
0.17
9
39
GLU
0.17
10
40
PRO
0.16
11
41
LEU
0.16
12
42
GLY
0.18
13
43
VAL
0.21
14
44
TYR
0.20
15
45
ASP
0.20
16
46
PRO
0.21
17
47
LEU
0.23
18
48
GLY
0.24
19
49
TRP
0.24
20
50
LEU
0.27
21
51
GLU
0.30
22
52
SER
0.27
23
53
GLU
0.34
24
54
PRO
0.36
25
55
GLU
0.31
26
56
ALA
0.30
27
57
PHE
0.26
28
58
GLU
0.25
29
59
ARG
0.25
30
60
ARG
0.23
31
61
ARG
0.25
32
62
ALA
0.30
3D View
Download PDB file DAQ[Cα]
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DAQ Score Table

Score range in the table: -0.13 .. 0.48
-0.13
0.48
#
Residue identifier
Residue name
DAQscore[ATOM]
1
31
SER
0.04
2
32
GLU
0.07
3
33
ILE
0.10
4
34
GLU
0.10
5
35
LEU
0.10
6
36
GLY
0.10
7
37
VAL
0.10
8
38
THR
0.11
9
39
GLU
0.11
10
40
PRO
0.11
11
41
LEU
0.17
12
42
GLY
0.17
13
43
VAL
0.16
14
44
TYR
0.16
15
45
ASP
0.15
16
46
PRO
0.19
17
47
LEU
0.24
18
48
GLY
0.26
19
49
TRP
0.28
20
50
LEU
0.29
21
51
GLU
0.31
22
52
SER
0.31
23
53
GLU
0.35
24
54
PRO
0.39
25
55
GLU
0.38
26
56
ALA
0.37
27
57
PHE
0.38
28
58
GLU
0.38
29
59
ARG
0.39
30
60
ARG
0.41
31
61
ARG
0.43
32
62
ALA
0.45
3D View
Download PDB file DAQ[SS]
Download Secondary Structure Prediction file
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DAQ Score Table

Score range in the table: -0.27 .. 0.42
-0.27
0.42
#
Residue identifier
Residue name
DAQscore[SS]
1
31
SER
-0.07
2
32
GLU
-0.06
3
33
ILE
-0.03
4
34
GLU
-0.01
5
35
LEU
0.00
6
36
GLY
0.03
7
37
VAL
0.03
8
38
THR
0.03
9
39
GLU
0.03
10
40
PRO
0.02
11
41
LEU
0.02
12
42
GLY
0.04
13
43
VAL
0.09
14
44
TYR
0.14
15
45
ASP
0.09
16
46
PRO
0.02
17
47
LEU
-0.05
18
48
GLY
-0.05
19
49
TRP
-0.01
20
50
LEU
0.01
21
51
GLU
0.05
22
52
SER
0.08
23
53
GLU
0.11
24
54
PRO
0.14
25
55
GLU
0.13
26
56
ALA
0.16
27
57
PHE
0.18
28
58
GLU
0.15
29
59
ARG
0.12
30
60
ARG
0.09
31
61
ARG
0.06
32
62
ALA
0.10
3D View
Download PDB file DAQ[Total]
Render Map
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DAQ Score Table